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23 commits

Author SHA1 Message Date
lxobr
6223ecf05b
feat: optimize repeated entity extraction (#1682)
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## Description
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- Added an `edge_text` field to edges that auto-fills from
`relationship_type` if not provided.
- Containts edges now store descriptions for better embedding
- Updated and refactored indexing so that edge_text gets embedded and
exposed
- Updated retrieval to use the new embeddings 
- Added a test to verify edge_text exists in the graph with the correct
format.

## Type of Change
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- [ ] Bug fix (non-breaking change that fixes an issue)
- [x] New feature (non-breaking change that adds functionality)
- [ ] Breaking change (fix or feature that would cause existing
functionality to change)
- [ ] Documentation update
- [x] Code refactoring
- [x] Performance improvement
- [ ] Other (please specify):

## Screenshots/Videos (if applicable)
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## Pre-submission Checklist
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- [x] **I have tested my changes thoroughly before submitting this PR**
- [x] **This PR contains minimal changes necessary to address the
issue/feature**
- [x] My code follows the project's coding standards and style
guidelines
- [x] I have added tests that prove my fix is effective or that my
feature works
- [ ] I have added necessary documentation (if applicable)
- [ ] All new and existing tests pass
- [x] I have searched existing PRs to ensure this change hasn't been
submitted already
- [ ] I have linked any relevant issues in the description
- [ ] My commits have clear and descriptive messages

## DCO Affirmation
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2025-10-30 13:56:06 +01:00
Igor Ilic
13d1133680 chore: Change comments 2025-10-10 17:14:10 +02:00
Igor Ilic
abfcbc69d6 refactor: Have embedding calls run in async gather 2025-10-10 15:36:36 +02:00
Igor Ilic
38cdacbcb6
fix: Resolve issue with Gemini adapter (#1494)
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## Description
Resolve Gemini Adapter issues:
 1. resolve embedding batch issue,
2. Resolve slowness because gemini tokenizer was sending word per word
to Googles API to count tokens (using OpenAI's local tokenizer to count
tokens for Gemini now)
 3. Update deprecated library and move to instructor

## Type of Change
<!-- Please check the relevant option -->
- [x] Bug fix (non-breaking change that fixes an issue)
- [ ] New feature (non-breaking change that adds functionality)
- [ ] Breaking change (fix or feature that would cause existing
functionality to change)
- [ ] Documentation update
- [ ] Code refactoring
- [ ] Performance improvement
- [ ] Other (please specify):

## Pre-submission Checklist
<!-- Please check all boxes that apply before submitting your PR -->
- [ ] **I have tested my changes thoroughly before submitting this PR**
- [ ] **This PR contains minimal changes necessary to address the
issue/feature**
- [ ] My code follows the project's coding standards and style
guidelines
- [ ] I have added tests that prove my fix is effective or that my
feature works
- [ ] I have added necessary documentation (if applicable)
- [ ] All new and existing tests pass
- [ ] I have searched existing PRs to ensure this change hasn't been
submitted already
- [ ] I have linked any relevant issues in the description
- [ ] My commits have clear and descriptive messages

## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin.
2025-10-07 18:04:18 +02:00
hajdul88
32996aa0d0 feat: adds new error classes to llm and databases + introduces loglevel and logging from child error 2025-08-13 13:40:50 +02:00
Igor Ilic
a75a79f012
Lancedb async lock (#1222)
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---------

Co-authored-by: Vasilije <8619304+Vasilije1990@users.noreply.github.com>
2025-08-12 08:46:15 -04:00
Igor Ilic
8d4ed35cbe
Fix low level pipeline (#1203)
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2025-08-05 17:01:48 +02:00
Igor Ilic
5b6e946c43
fix: Add async lock for dynamic vector table creation (#1175)
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## Description
Add async lock for dynamic table creation

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the terms of the Topoteretes Developer Certificate of Origin.
2025-08-01 15:12:04 +02:00
Igor Ilic
a036787ad1
Embedding string fix [COG-1900] (#742)
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## Description
Allow embedding of big strings to support full row embedding in SQL
databases

## DCO Affirmation
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the terms of the Topoteretes Developer Certificate of Origin.
2025-04-16 22:39:06 +02:00
Igor Ilic
9f587a01a4
feat: Relational db to graph db [COG-1468] (#644)
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## Description
Add ability to migrate relational database to graph database

## DCO Affirmation
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the terms of the Topoteretes Developer Certificate of Origin
2025-03-26 11:40:06 +01:00
Daniel Molnar
73db1a5a53
fix: human readable logs (#658)
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## Description
Introducing scructlog.

## DCO Affirmation
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2025-03-25 11:54:40 +01:00
Igor Ilic
f3e296b171
chore: Ruff format fix (#516)
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<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->

## Summary by CodeRabbit

- **Style**
- Made minor internal formatting adjustments to improve consistency.
These changes do not affect any visible functionality for end-users.

<!-- end of auto-generated comment: release notes by coderabbit.ai -->
2025-02-10 06:40:16 -05:00
Boris Arzentar
95ee62ad79 fix: extract index and field name from indexable data points 2025-02-08 15:21:59 +01:00
Boris
f75e35c337
fix: custom model pipeline (#508)
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## Description
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## DCO Affirmation
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the terms of the Topoteretes Developer Certificate of Origin


<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit


- **New Features**
• Graph visualizations now allow exporting to a user-specified file path
for more flexible output management.
• The text embedding process has been enhanced with an additional
tokenizer option for improved performance.
• A new `ExtendableDataPoint` class has been introduced for future
extensions.
• New JSON files for companies and individuals have been added to
facilitate testing and data processing.

- **Improvements**
• Search functionality now uses updated identifiers for more reliable
content retrieval.
• Metadata handling has been streamlined across various classes by
removing unnecessary type specifications.
• Enhanced serialization of properties in the Neo4j adapter for improved
handling of complex structures.
• The setup process for databases has been improved with a new
asynchronous setup function.

- **Chores**
• Dependency and configuration updates improve overall stability and
performance.

<!-- end of auto-generated comment: release notes by coderabbit.ai -->
2025-02-08 02:00:15 +01:00
vasilije
60c8fd103b ruff format 2025-01-05 19:09:08 +01:00
lxobr
262deee26e
Cog 813 source code chunks (#383)
* fix: pass the list of all CodeFiles to enrichment task

* feat: introduce SourceCodeChunk, update metadata

* feat: get_source_code_chunks code graph pipeline task

* feat: integrate get_source_code_chunks task, comment out summarize_code

* Fix code summarization (#387)

* feat: update data models

* feat: naive parse long strings in source code

* fix: get_non_py_files instead of get_non_code_files

* fix: limit recursion, add comment

* handle embedding empty input error (#398)

* feat: robustly handle CodeFile source code

* refactor: sort imports

* todo: add support for other embedding models

* feat: add custom logger

* feat: add robustness to get_source_code_chunks

Co-authored-by: coderabbitai[bot] <136622811+coderabbitai[bot]@users.noreply.github.com>

* feat: improve embedding exceptions

* refactor: format indents, rename module

---------

Co-authored-by: alekszievr <44192193+alekszievr@users.noreply.github.com>
Co-authored-by: coderabbitai[bot] <136622811+coderabbitai[bot]@users.noreply.github.com>
2024-12-26 13:53:38 +01:00
alekszievr
bfa0f06fb4
Add type to DataPoint metadata (#364)
* Add type to DataPoint metadata

* Add missing index_fields

* Use DataPoint UUID type in pgvector create_data_points

* Make _metadata mandatory everywhere
2024-12-16 16:27:03 +01:00
Boris Arzentar
0b8b270933 fix: make get_embeddable_data static 2024-12-03 21:47:23 +01:00
Boris Arzentar
11acabdb6a fix: remove duplicate nodes and edges before saving; Fix FalkorDB vector index; 2024-12-02 10:10:18 +01:00
Boris
6403d15a76
fix: enable falkordb and add test for it (#31) 2024-11-27 22:55:30 +01:00
Boris
64b8aac86f
feat: code graph swe integration
Co-authored-by: hajdul88 <52442977+hajdul88@users.noreply.github.com>
Co-authored-by: hande-k <handekafkas7@gmail.com>
Co-authored-by: Igor Ilic <igorilic03@gmail.com>
Co-authored-by: Vasilije <8619304+Vasilije1990@users.noreply.github.com>
Co-authored-by: Igor Ilic <30923996+dexters1@users.noreply.github.com>
2024-11-27 09:32:29 +01:00
Igor Ilic
15b7b8ef2b fix: Resolve issue with table names in SQL commands
Some SQL commands require lowercase characters in table names unless table name is wrapped in quotes. Renamed all new tables to use lowercase

Fix COG-677
2024-11-20 14:54:35 +01:00
Boris
52180eb6b5
feat: COG-184 add falkordb (#192)
* feat: add falkordb adapter

---------

Co-authored-by: hajdul88 <52442977+hajdul88@users.noreply.github.com>
2024-11-11 18:20:52 +01:00