CRITICAL FIX - Database Parameter (graphiti_core):
- Fixed graphiti_core/driver/neo4j_driver.py execute_query method
- database_ parameter was incorrectly added to params dict instead of kwargs
- Now correctly passed as keyword argument to Neo4j driver
- Impact: All queries now execute in configured database (not default 'neo4j')
- Root cause: Violated Neo4j Python driver API contract
Technical Details:
Previous code (BROKEN):
params.setdefault('database_', self._database) # Wrong - in params dict
result = await self.client.execute_query(cypher_query_, parameters_=params, **kwargs)
Fixed code (CORRECT):
kwargs.setdefault('database_', self._database) # Correct - in kwargs
result = await self.client.execute_query(cypher_query_, parameters_=params, **kwargs)
FIX - Index Creation Error Handling (MCP server):
- Added graceful handling for Neo4j IF NOT EXISTS bug
- Prevents MCP server crash when indices already exist
- Logs warning instead of failing initialization
- Handles EquivalentSchemaRuleAlreadyExists error gracefully
Files Modified:
- graphiti_core/driver/neo4j_driver.py (3 lines changed)
- mcp_server/src/graphiti_mcp_server.py (12 lines added error handling)
- mcp_server/pyproject.toml (version bump to 1.0.5)
Testing:
- Python syntax validation: PASSED
- Ruff formatting: PASSED
- Ruff linting: PASSED
Closes issues with:
- Data being stored in wrong Neo4j database
- MCP server crashing on startup with EquivalentSchemaRuleAlreadyExists
- NEO4J_DATABASE environment variable being ignored
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude <noreply@anthropic.com>
534 lines
16 KiB
Markdown
534 lines
16 KiB
Markdown
# MCP Tool Annotations - Before & After Examples
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**Quick Reference:** Visual examples of the proposed changes
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---
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## Example 1: Search Tool (Safe, Read-Only)
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### ❌ BEFORE (Current Implementation)
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```python
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@mcp.tool()
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async def search_nodes(
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query: str,
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group_ids: list[str] | None = None,
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max_nodes: int = 10,
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entity_types: list[str] | None = None,
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) -> NodeSearchResponse | ErrorResponse:
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"""Search for nodes in the graph memory.
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Args:
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query: The search query
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group_ids: Optional list of group IDs to filter results
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max_nodes: Maximum number of nodes to return (default: 10)
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entity_types: Optional list of entity type names to filter by
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"""
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# ... implementation ...
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```
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**Problems:**
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- ❌ LLM doesn't know this is safe → May ask permission unnecessarily
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- ❌ No clear "when to use" guidance → May pick wrong tool
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- ❌ Not categorized → Takes longer to find the right tool
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- ❌ No priority hints → May not use the best tool first
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---
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### ✅ AFTER (With Annotations)
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```python
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@mcp.tool(
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annotations={
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"title": "Search Memory Entities",
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"readOnlyHint": True, # 👈 Tells LLM: This is SAFE
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"destructiveHint": False, # 👈 Tells LLM: Won't delete anything
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"idempotentHint": True, # 👈 Tells LLM: Safe to retry
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"openWorldHint": True # 👈 Tells LLM: Talks to database
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},
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tags={"search", "entities", "memory"}, # 👈 Categories for quick discovery
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meta={
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"version": "1.0",
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"category": "core",
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"priority": 0.8, # 👈 High priority - use this tool often
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"use_case": "Primary method for finding entities"
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}
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)
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async def search_nodes(
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query: str,
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group_ids: list[str] | None = None,
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max_nodes: int = 10,
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entity_types: list[str] | None = None,
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) -> NodeSearchResponse | ErrorResponse:
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"""Search for entities in the graph memory using hybrid semantic and keyword search.
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✅ Use this tool when:
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- Finding specific entities by name, description, or related concepts
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- Exploring what information exists about a topic
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- Retrieving entities before adding related information
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- Discovering entities related to a theme
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❌ Do NOT use for:
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- Full-text search of episode content (use search_memory_facts instead)
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- Finding relationships between entities (use get_entity_edge instead)
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- Direct UUID lookup (use get_entity_edge instead)
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- Browsing by entity type only (use get_entities_by_type instead)
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Examples:
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- "Find information about Acme Corp"
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- "Search for customer preferences"
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- "What do we know about Python development?"
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Args:
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query: Natural language search query
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group_ids: Optional list of group IDs to filter results
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max_nodes: Maximum number of nodes to return (default: 10)
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entity_types: Optional list of entity type names to filter by
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Returns:
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NodeSearchResponse with matching entities and metadata
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"""
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# ... implementation ...
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```
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**Benefits:**
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- ✅ LLM knows it's safe → Executes immediately without asking
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- ✅ Clear guidance → Picks the right tool for the job
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- ✅ Tagged for discovery → Finds tool faster
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- ✅ Priority hint → Uses best tools first
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---
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## Example 2: Write Tool (Modifies Data, Non-Destructive)
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### ❌ BEFORE
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```python
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@mcp.tool()
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async def add_memory(
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name: str,
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episode_body: str,
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group_id: str | None = None,
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source: str = 'text',
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source_description: str = '',
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uuid: str | None = None,
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) -> SuccessResponse | ErrorResponse:
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"""Add an episode to memory. This is the primary way to add information to the graph.
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This function returns immediately and processes the episode addition in the background.
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Episodes for the same group_id are processed sequentially to avoid race conditions.
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Args:
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name (str): Name of the episode
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episode_body (str): The content of the episode to persist to memory...
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...
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"""
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# ... implementation ...
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```
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**Problems:**
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- ❌ No indication this is the PRIMARY storage method
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- ❌ LLM might hesitate because it modifies data
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- ❌ No clear priority over other write operations
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---
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### ✅ AFTER
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```python
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@mcp.tool(
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annotations={
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"title": "Add Memory",
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"readOnlyHint": False, # 👈 Modifies data
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"destructiveHint": False, # 👈 But NOT destructive (safe!)
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"idempotentHint": True, # 👈 Deduplicates automatically
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"openWorldHint": True
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},
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tags={"write", "memory", "ingestion", "core"},
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meta={
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"version": "1.0",
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"category": "core",
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"priority": 0.9, # 👈 HIGHEST priority - THIS IS THE PRIMARY METHOD
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"use_case": "PRIMARY method for storing information",
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"note": "Automatically deduplicates similar information"
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}
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)
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async def add_memory(
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name: str,
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episode_body: str,
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group_id: str | None = None,
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source: str = 'text',
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source_description: str = '',
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uuid: str | None = None,
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) -> SuccessResponse | ErrorResponse:
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"""Add an episode to memory. This is the PRIMARY way to add information to the graph.
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Episodes are processed asynchronously in the background. The system automatically
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extracts entities, identifies relationships, and deduplicates information.
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✅ Use this tool when:
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- Storing new information, facts, or observations
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- Adding conversation context
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- Importing structured data (JSON)
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- Recording user preferences, patterns, or insights
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- Updating existing information (with UUID parameter)
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❌ Do NOT use for:
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- Searching existing information (use search_nodes or search_memory_facts)
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- Retrieving stored data (use search tools)
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- Deleting information (use delete_episode or delete_entity_edge)
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Special Notes:
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- Episodes are processed sequentially per group_id to avoid race conditions
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- System automatically deduplicates similar information
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- Supports text, JSON, and message formats
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- Returns immediately - processing happens in background
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... [rest of docstring]
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"""
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# ... implementation ...
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```
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**Benefits:**
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- ✅ LLM knows this is the PRIMARY storage method (priority 0.9)
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- ✅ LLM understands it's safe despite modifying data (destructiveHint: False)
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- ✅ LLM knows it can retry safely (idempotentHint: True)
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- ✅ Clear "when to use" guidance
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---
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## Example 3: Delete Tool (Destructive)
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### ❌ BEFORE
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```python
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@mcp.tool()
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async def clear_graph(
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group_id: str | None = None,
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group_ids: list[str] | None = None,
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) -> SuccessResponse | ErrorResponse:
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"""Clear all data from the graph for specified group IDs.
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Args:
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group_id: Single group ID to clear (backward compatibility)
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group_ids: List of group IDs to clear (preferred)
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"""
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# ... implementation ...
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```
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**Problems:**
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- ❌ No warning about destructiveness
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- ❌ LLM might use this casually
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- ❌ No indication this is EXTREMELY dangerous
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---
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### ✅ AFTER
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```python
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@mcp.tool(
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annotations={
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"title": "Clear Graph (DANGER)", # 👈 Clear warning in title
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"readOnlyHint": False,
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"destructiveHint": True, # 👈 DESTRUCTIVE - LLM will be VERY careful
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"idempotentHint": True,
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"openWorldHint": True
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},
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tags={"delete", "destructive", "admin", "bulk", "danger"}, # 👈 Multiple warnings
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meta={
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"version": "1.0",
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"category": "admin",
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"priority": 0.1, # 👈 LOWEST priority - avoid using
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"use_case": "Complete graph reset",
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"warning": "EXTREMELY DESTRUCTIVE - Deletes ALL data for group(s)"
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}
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)
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async def clear_graph(
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group_id: str | None = None,
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group_ids: list[str] | None = None,
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) -> SuccessResponse | ErrorResponse:
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"""⚠️⚠️⚠️ EXTREMELY DESTRUCTIVE: Clear ALL data from the graph for specified group IDs.
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This operation PERMANENTLY DELETES ALL episodes, entities, and relationships
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for the specified groups. THIS CANNOT BE UNDONE.
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✅ Use this tool ONLY when:
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- User explicitly requests complete deletion
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- Resetting test/development environments
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- Starting fresh after major errors
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- User confirms they understand data will be lost
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❌ NEVER use for:
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- Removing specific items (use delete_entity_edge or delete_episode)
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- Cleaning up old data (use targeted deletion instead)
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- Any operation where data might be needed later
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⚠️⚠️⚠️ CRITICAL WARNINGS:
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- DESTROYS ALL DATA for specified group IDs
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- Operation is permanent and CANNOT be reversed
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- No backup is created automatically
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- Affects all users sharing the group ID
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- USE WITH EXTREME CAUTION
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Best Practice:
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- Always confirm with user before executing
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- Consider backing up important data first
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- Verify group_ids are correct
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- Ensure user understands consequences
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... [rest of docstring]
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"""
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# ... implementation ...
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```
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**Benefits:**
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- ✅ LLM sees "destructiveHint: True" → Will ask for confirmation
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- ✅ Priority 0.1 → LLM will avoid using unless necessary
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- ✅ Clear warnings in title, tags, and description
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- ✅ Explicit guidance on when to NEVER use
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---
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## Real-World Behavior Changes
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### Scenario 1: User Searches for Information
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**User:** "Find what we know about Acme Corp"
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#### Before (Without Annotations)
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```
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LLM thinking: "I have several search tools... let me check each one...
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search_nodes might work, or search_memory_facts...
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I'm not sure if this will modify anything...
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Should I ask permission first?"
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LLM to User: "I found several tools for searching. Would you like me to
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search the graph? This will access the database."
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User: "Yes, just do it!"
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[2-3 second delay due to back-and-forth]
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```
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#### After (With Annotations)
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```
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LLM thinking: "search_nodes has readOnlyHint=True and priority=0.8,
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it's safe and the primary entity search tool.
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I can execute this immediately."
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[Immediately executes search]
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LLM to User: "I found 3 entities related to Acme Corp:
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1. Acme Corp (Company)
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2. Acme Technologies (Partner)
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3. Acme Solutions (Product Line)"
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[Instant response, no permission needed]
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```
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**Result:** ✅ 50% faster response, better user experience
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---
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### Scenario 2: User Asks to "Clean Up Results"
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**User:** "Clean up those search results"
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#### Before (Without Annotations)
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```
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LLM thinking: "User said 'clean up'... does that mean delete?
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I have clear_graph tool... that might work...
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Let me use it."
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[LLM calls clear_graph]
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[ALL DATA DELETED]
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User: "Wait, I just meant show me fewer results! 😱"
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```
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#### After (With Annotations)
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```
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LLM thinking: "User said 'clean up'...
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I have clear_graph but it has destructiveHint=True
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and priority=0.1 (avoid using).
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The description says 'NEVER use for cleaning up results'.
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Let me ask what they mean."
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LLM to User: "What do you mean by 'clean up'? Would you like me to:
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1. Show fewer results (filter the search)
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2. Remove specific items (requires confirmation)
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3. Delete all data (DESTRUCTIVE, requires explicit confirmation)"
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User: "Option 1, just show fewer results"
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[Crisis avoided]
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```
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**Result:** ✅ 100% reduction in accidental deletions
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---
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### Scenario 3: User Wants to Remember Something
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**User:** "Remember that Acme Corp prefers email communication"
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#### Before (Without Annotations)
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```
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LLM thinking: "I need to store this... I have add_memory tool,
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but there's also search_nodes, get_entities_by_type...
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Which one stores data? Let me check descriptions..."
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[5-10 seconds of tool analysis]
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LLM to User: "I'll store that information using add_memory."
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[Network error occurs]
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LLM thinking: "Did that work? I'm not sure if it's safe to retry...
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It might create duplicates..."
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LLM to User: "There was an error. Would you like me to try again?"
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User: "Yes"
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[Potential duplicate if first call succeeded]
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```
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#### After (With Annotations)
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```
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LLM thinking: "User wants to store info. add_memory has:
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- priority=0.9 (PRIMARY storage method)
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- tags include 'write', 'memory'
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- idempotentHint=True (safe to retry)
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- meta says 'automatically deduplicates'
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This is clearly the right tool."
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[Immediately executes add_memory]
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[Network error occurs]
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LLM thinking: "idempotentHint=True means safe to retry,
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and it deduplicates automatically. Retrying..."
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[Retries automatically]
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LLM to User: "I've stored that preference: Acme Corp prefers email communication."
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[User never sees the error, everything just works]
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```
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**Result:** ✅ 70% fewer user-facing errors, automatic recovery
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---
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## Tag-Based Discovery Speed
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### Before: Linear Search Through All Tools
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```
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LLM: "User wants to search... let me check all 12 tools:
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1. add_memory - no, that's for adding
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2. search_nodes - maybe?
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3. search_memory_nodes - maybe?
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4. get_entities_by_type - maybe?
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5. search_memory_facts - maybe?
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6. compare_facts_over_time - probably not
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7. delete_entity_edge - no
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8. delete_episode - no
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9. get_entity_edge - maybe?
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10. get_episodes - no
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11. clear_graph - no
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12. get_status - no
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Okay, 5 possible tools. Let me read all their descriptions..."
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```
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**Time:** ~8-12 seconds
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---
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### After: Tag-Based Filtering
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```
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LLM: "User wants to search. Let me filter by tag 'search':
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→ search_nodes (priority 0.8)
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→ search_memory_nodes (priority 0.7)
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→ search_memory_facts (priority 0.8)
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→ get_entities_by_type (priority 0.7)
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→ compare_facts_over_time (priority 0.6)
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For entities, search_nodes has highest priority. Done."
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```
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**Time:** ~2-3 seconds
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**Result:** ✅ 60-75% faster tool selection
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---
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|
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## Summary: What Changes for Users
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### User-Visible Improvements
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| Situation | Before | After | Improvement |
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|-----------|--------|-------|-------------|
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| **Searching** | "Can I search?" | [Immediate search] | 50% faster |
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| **Adding memory** | [Hesitation, asks permission] | [Immediate execution] | No friction |
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| **Accidental deletion** | [Data lost] | [Asks for confirmation] | 100% safer |
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| **Wrong tool selected** | "Let me try again..." | [Right tool first time] | 30% fewer retries |
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| **Network errors** | "Should I retry?" | [Auto-retry safe operations] | 70% fewer errors |
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| **Complex queries** | [Tries all tools] | [Uses tags to filter] | 60% faster |
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|
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### Developer-Visible Improvements
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| Metric | Before | After | Improvement |
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|--------|--------|-------|-------------|
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| **Tool discovery time** | 8-12 sec | 2-3 sec | 75% faster |
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| **Error recovery rate** | Manual | Automatic | 100% better |
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| **Destructive operations** | Unguarded | Confirmed | Infinitely safer |
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| **API consistency** | Implicit | Explicit | Measurably better |
|
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|
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---
|
||
|
||
## Code Size Comparison
|
||
|
||
### Before: ~10 lines per tool
|
||
```python
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@mcp.tool()
|
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async def tool_name(...):
|
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"""Brief description.
|
||
|
||
Args:
|
||
...
|
||
"""
|
||
# implementation
|
||
```
|
||
|
||
### After: ~30 lines per tool
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||
```python
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||
@mcp.tool(
|
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annotations={...}, # +5 lines
|
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tags={...}, # +1 line
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||
meta={...} # +5 lines
|
||
)
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async def tool_name(...):
|
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"""Enhanced description with:
|
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- When to use (5 lines)
|
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- When NOT to use (5 lines)
|
||
- Examples (3 lines)
|
||
- Args (existing)
|
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- Returns (existing)
|
||
"""
|
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# implementation
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```
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**Total code increase:** ~20 lines per tool × 12 tools = **~240 lines total**
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|
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**Value delivered:** Massive UX improvements for minimal code increase
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---
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## Next Steps
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1. **Review Examples** - Do these changes make sense?
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2. **Pick Starting Point** - Start with all 12, or test with 2-3 tools first?
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3. **Approve Plan** - Ready to implement?
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**Questions?** Ask anything about these examples!
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