<!-- .github/pull_request_template.md -->
## Description
Added user authorization through JWT header, reworked user and relevant
RBAC models to accompany future User Permission system.
## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit
- **New Features**
- Introduced an automated workflow to validate server startup.
- Added secure JWT token generation for improved session handling.
- Enabled a new structure for permission management with role and
tenant-based controls, including endpoints for creating roles, tenants,
and assigning permissions.
- Added methods for assigning default permissions to roles, tenants, and
users.
- Introduced new classes for managing default permissions for roles,
tenants, and users.
- **Refactor**
- Streamlined authentication and user management flows with enhanced
error handling.
- **Tests**
- Upgraded integration tests with improved database initialization and
data pruning for a more stable environment.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->
---------
Co-authored-by: Vasilije <8619304+Vasilije1990@users.noreply.github.com>
<!-- .github/pull_request_template.md -->
## Description
<!-- Provide a clear description of the changes in this PR -->
## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit
- **Chores**
- Adjusted a dependency version range for improved compatibility with
newer releases.
- Enhanced dependency management workflow by integrating Poetry and
adding a commit step for tracking changes.
- Updated Python version in the workflow to 3.12 and improved repository
checkout steps.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->
---------
Co-authored-by: vasilije <vas.markovic@gmail.com>
Co-authored-by: Vasilije <8619304+Vasilije1990@users.noreply.github.com>
<!-- .github/pull_request_template.md -->
## Description
<!-- Provide a clear description of the changes in this PR -->
## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit
- **Chores**
- Introduced an automated process that routinely updates project
dependencies. This enhancement minimizes manual maintenance and helps
ensure optimal system stability and security for users.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->
<!-- .github/pull_request_template.md -->
## Description
This PR contains eval framework changes due to the autooptimizer
integration
## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit
- **New Features**
- Enhanced answer generation now returns structured answer details.
- Search functionality accepts configurable prompt inputs.
- Option to generate a metrics dashboard from evaluations.
- Corpus building tasks now support adjustable chunk settings for
greater flexibility.
- New task retrieval functionality allows for flexible task
configuration.
- Introduced new methods for creating and managing metrics dashboards.
- **Refactor/Chore**
- Streamlined API signatures and reorganized module interfaces for
better consistency.
- Updated import paths to reflect new module structure.
- **Tests**
- Updated test scenarios to align with new configurations and parameter
adjustments.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->
<!-- .github/pull_request_template.md -->
## Description
<!-- Provide a clear description of the changes in this PR -->
## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit
- **Chores**
- Enhanced deployment and build processes to improve system reliability
and simplify dependency management.
- **New Features**
- Added a new dependency (`uv>=0.6.3`) to support enhanced
functionality.
- Updated extra dependencies for `codegraph` to include the
`transformers` library.
- Improved logging on server startup for clearer operational feedback.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->
---------
Co-authored-by: coderabbitai[bot] <136622811+coderabbitai[bot]@users.noreply.github.com>
<!-- .github/pull_request_template.md -->
## Description
<!-- Provide a clear description of the changes in this PR -->
## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit
- **Tests**
- Introduced new automated testing workflows for Ollama and Gemini,
triggered by pull requests and manual dispatch.
- The Ollama workflow sets up the service and executes a simple example
test to enhance continuous integration.
- Enhanced dependency update workflow with new triggers for push and
pull request events, and added an optional debug logging parameter.
- Added new capabilities for audio and image transcription within the
Ollama API adapter.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->
---------
Co-authored-by: Daniel Molnar <soobrosa@gmail.com>
<!-- .github/pull_request_template.md -->
## Description
Add testing of cognee telemetry
## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit
- **Tests**
- Introduced an automated testing process for telemetry components,
running unit tests across multiple environments to ensure consistent
performance. The workflow efficiently manages test execution and error
reporting, speeding up development cycles.
- **Chores**
- Enhanced dependency management and cleanup procedures, significantly
contributing to overall system stability, faster feedback cycles, and
improved release quality.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->
<!-- .github/pull_request_template.md -->
## Description
<!-- Provide a clear description of the changes in this PR -->
## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit
- **New Features**
- Introduced an automated deployment workflow to build and push
container images.
- Updated dependency management to include additional database support.
- **Refactor**
- Enhanced asynchronous operations and logging in the server for
improved performance.
- Optimized extraction and retrieval processes for code-related data.
- **Chores**
- Streamlined build configurations and startup scripts for greater
reliability.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->
---------
Co-authored-by: hajdul88 <52442977+hajdul88@users.noreply.github.com>
Co-authored-by: Igor Ilic <igorilic03@gmail.com>
<!-- .github/pull_request_template.md -->
## Description
<!-- Provide a clear description of the changes in this PR -->
## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit
- **Tests**
- Updated evaluation checks by removing assertions related to the
relationship between `corpus_list` and `qa_pairs`, now focusing solely
on `qa_pairs` limits.
- **Refactor**
- Improved content processing to append each paragraph individually to
`corpus_list`, enhancing clarity in data structure.
- Simplified type annotations in the `load_corpus` method across
multiple adapters, ensuring consistency in return types.
- **Chores**
- Updated dependency installation commands in GitHub Actions workflows
for Python 3.10, 3.11, and 3.12 to include additional evaluation-related
dependencies.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->
---------
Co-authored-by: Vasilije <8619304+Vasilije1990@users.noreply.github.com>
<!-- .github/pull_request_template.md -->
## Description
<!-- Provide a clear description of the changes in this PR -->
## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit
- **New Features**
- Enhanced graph analytics now offer detailed metrics—including shortest
path lengths, diameter, and clustering coefficients—to provide deeper
insights.
- Added new functions for creating connected test graphs and validating
metrics against predefined ground truth values.
- Introduced a new JSON file containing metrics for connected and
disconnected graph structures.
- **Improvements**
- Updated how graphs are projected to consistently use undirected
representations, ensuring more accurate and reliable metric
calculations.
- Streamlined metric consistency checks across different graph
processing methods for robust, reliable results.
- Simplified testing logic by consolidating metric assertions into a
single function call.
- **Chores**
- Removed unnecessary secret variables from the workflow configuration,
potentially affecting access to certain resources.
- Updated secret management to include the new `OPENAI_API_KEY`.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->
<!-- .github/pull_request_template.md -->
## Description
<!-- Provide a clear description of the changes in this PR -->
## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit
- **Chores**
- Introduced an automated process that regularly updates project
dependencies, enhancing stability and ensuring the app remains secure
and up-to-date.
- Removed an outdated workflow for profiling Python scripts,
streamlining the CI/CD process.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->
<!-- .github/pull_request_template.md -->
## Description
GraphRAG vs RAG cognee notebook
## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit
- **Tests**
- Implemented automated validations to continuously monitor and ensure
the reliability of our interactive notebook features. These improvements
enhance overall stability and performance, enabling a more consistent
and dependable user experience.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->
---------
Co-authored-by: Boris <boris@topoteretes.com>
<!-- .github/pull_request_template.md -->
## Description
<!-- Provide a clear description of the changes in this PR -->
## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit
- **Chores**
- Improved automated testing setups to run across multiple operating
systems (Ubuntu and macOS) for Python 3.10, 3.11, and 3.12.
- Enhanced compatibility and coverage across diverse environments,
ensuring a more robust validation process.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->
---------
Co-authored-by: soekja <wes.hubert@gmail.com>
Co-authored-by: Boris <boris@topoteretes.com>
<!-- .github/pull_request_template.md -->
## Description
<!-- Provide a clear description of the changes in this PR -->
## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit
- **New Features**
- Enhanced code search and dependency analysis for improved accuracy.
- Introduced a new high-performance text embedding option.
- Added an additional execution entry point for code graph processing.
- New optional parameters for flexible property selection in retrieval
functions.
- Introduced new classes for handling import statements, function
definitions, and class definitions.
- Updated embedding engine selection based on configuration options.
- **Bug Fixes**
- Improved error handling in search operations and database queries for
a more stable user experience.
- Enhanced error logging for source code parsing.
- **Refactor**
- Streamlined asynchronous processing and refactored internal dependency
extraction.
- Updated configuration and integration settings to enhance overall
reliability.
- Restructured functions for simplified dependency handling.
- **Chores**
- Upgraded and reorganized dependency management with optional libraries
for extended functionality.
- Added new secret parameters for embedding configuration in workflow
settings.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->
---------
Co-authored-by: vasilije <vas.markovic@gmail.com>
<!-- .github/pull_request_template.md -->
## Description
Change version to latest llama index cognee integration version which
has a proper fix for the failing notebook
## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit
- **Chores**
- Updated an AI integration dependency to version 0.1.3 in both the
testing workflow and the Jupyter notebook, ensuring that the environment
uses the latest version for improved consistency during tests.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->
Co-authored-by: Vasilije <8619304+Vasilije1990@users.noreply.github.com>
<!-- .github/pull_request_template.md -->
This PR contains the evaluation framework development for cognee
## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit
- **New Features**
- Expanded evaluation framework now integrates asynchronous corpus
building, question answering, and performance evaluation with adaptive
benchmarks for improved metrics (correctness, exact match, and F1
score).
- **Infrastructure**
- Added database integration for persistent storage of questions,
answers, and metrics.
- Launched an interactive metrics dashboard featuring advanced
visualizations.
- Introduced an automated testing workflow for continuous quality
assurance.
- **Documentation**
- Updated guidelines for generating concise, clear answers.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->
<!-- .github/pull_request_template.md -->
## Description
<!-- Provide a clear description of the changes in this PR -->
## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit
- **Chores**
- Introduced an automated maintenance process to periodically remove
outdated workflow runs. This process runs on a regular weekly schedule
and can also be triggered manually, helping keep system operations
efficient.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->
<!-- .github/pull_request_template.md -->
## Description
<!-- Provide a clear description of the changes in this PR -->
## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin
<!-- .github/pull_request_template.md -->
## Description
<!-- Provide a clear description of the changes in this PR -->
## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit
- **Refactor**
- Updated the default processing flow by removing a descriptive metrics
task.
- **New Features**
- Introduced asynchronous graph management capabilities including
checks, projection, and deletion.
- Enhanced graph metrics extraction with additional analytics.
- **Chores**
- Improved timestamp handling using database-driven defaults.
- **Tests**
- Added tests to verify graph metrics consistency and accuracy.
- Integrated a new CI workflow for automated testing of graph metrics.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->
---------
Co-authored-by: Igor Ilic <30923996+dexters1@users.noreply.github.com>
Co-authored-by: Boris <boris@topoteretes.com>
<!-- .github/pull_request_template.md -->
## Description
Refactor search so query type doesn't need to be provided to make it
simpler for new users
## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit
- **Refactor**
- Improved the search interface by standardizing parameter usage with
explicit keyword arguments for specifying search types, enhancing
clarity and consistency.
- **Tests**
- Updated test cases and example integrations to align with the revised
search parameters, ensuring consistent behavior and reliable validation
of search outcomes.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->
<!-- .github/pull_request_template.md -->
## Description
<!-- Provide a clear description of the changes in this PR -->
## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit
- **Chores**
- Updated the CI configuration for integration tests to use revised
secret values, ensuring improved alignment with current external API
credential requirements and deprecating legacy references.
- Made several secrets optional in the workflow, enhancing flexibility
during execution.
- Removed several outdated secrets from multiple workflows, streamlining
the configuration.
- Improved error handling in the code processing logic by adding
exception management for `AttributeError` and `AssertionError`.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->
<!-- .github/pull_request_template.md -->
## Description
<!-- Provide a clear description of the changes in this PR -->
## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit
## Release Notes
- **Tests**
- Added comprehensive unit tests for graph model generation
- Introduced new test scenarios covering various data structures and
edge cases
- Implemented tests for document, chunk, and entity relationships
- **Chores**
- Updated continuous deployment workflow to trigger only on `dev` branch
The release focuses on improving test coverage and refining the
deployment process.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->
<!-- .github/pull_request_template.md -->
## Description
PR to test Gemini PR from holchan
1. Add Gemini LLM and Gemini Embedding support
2. Fix CodeGraph issue with chunks being bigger than maximum token value
3. Add Tokenizer adapters to CodeGraph
## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit
- **New Features**
- Added support for the Gemini LLM provider.
- Expanded LLM configuration options.
- Introduced a new GitHub Actions workflow for multimetric QA
evaluation.
- Added new environment variables for LLM and embedding configurations
across various workflows.
- **Bug Fixes**
- Improved error handling in various components.
- Updated tokenization and embedding processes.
- Removed warning related to missing `dict` method in data items.
- **Refactor**
- Simplified token extraction and decoding methods.
- Updated tokenizer interfaces.
- Removed deprecated dependencies.
- Enhanced retry logic and error handling in embedding processes.
- **Documentation**
- Updated configuration comments and settings.
- **Chores**
- Updated GitHub Actions workflows to accommodate new secrets and
environment variables.
- Modified evaluation parameters.
- Adjusted dependency management for optional libraries.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->
---------
Co-authored-by: holchan <61059652+holchan@users.noreply.github.com>
Co-authored-by: Boris <boris@topoteretes.com>
* feat: Add error handling in case user is already part of database and permission already given to group
Added error handling in case permission is already given to group and user is already part of group
Feature COG-656
* feat: Add user verification for accessing data
Verify user has access to data before returning it
Feature COG-656
* feat: Add compute search to cognee
Add compute search to cognee which makes searches human readable
Feature COG-656
* feat: Add simple instruction for system prompt
Add simple instruction for system prompt
Feature COG-656
* pass pydantic model tocognify
* feat: Add unauth access error to getting data
Raise unauth access error when trying to read data without access
Feature COG-656
* refactor: Rename query compute to query completion
Rename searching type from compute to completion
Refactor COG-656
* chore: Update typo in code
Update typo in string in code
Chore COG-656
* Add mcp to cognee
* Add simple README
* Update cognee-mcp/mcpcognee/__main__.py
Co-authored-by: coderabbitai[bot] <136622811+coderabbitai[bot]@users.noreply.github.com>
* Create dockerhub.yml
* Update get_cognify_router.py
* fix: Resolve reflection issue when running cognee a second time after pruning data
When running cognee a second time after pruning data some metadata doesn't get pruned.
This makes cognee believe some tables exist that have been deleted
Fix
* fix: Add metadata reflection fix to sqlite as well
Added fix when reflecting metadata to sqlite as well
Fix
* update
* Revert "fix: Add metadata reflection fix to sqlite as well"
This reverts commit 394a0b2dfb.
* COG-810 Implement a top-down dependency graph builder tool (#268)
* feat: parse repo to call graph
* Update/repo_processor/top_down_repo_parse.py task
* fix: minor improvements
* feat: file parsing jedi script optimisation
---------
* Add type to DataPoint metadata (#364)
* Add type to DataPoint metadata
* Add missing index_fields
* Use DataPoint UUID type in pgvector create_data_points
* Make _metadata mandatory everywhere
* Fixes
* Fixes to our demo
* feat: Add search by dataset for cognee
Added ability to search by datasets for cognee users
Feature COG-912
* feat: outsources chunking parameters to extract chunk from documents … (#289)
* feat: outsources chunking parameters to extract chunk from documents task
* fix: Remove backend lock from UI
Removed lock that prevented using multiple datasets in cognify
Fix COG-912
* COG 870 Remove duplicate edges from the code graph (#293)
* feat: turn summarize_code into generator
* feat: extract run_code_graph_pipeline, update the pipeline
* feat: minimal code graph example
* refactor: update argument
* refactor: move run_code_graph_pipeline to cognify/code_graph_pipeline
* refactor: indentation and whitespace nits
* refactor: add deprecated use comments and warnings
---------
Co-authored-by: Vasilije <8619304+Vasilije1990@users.noreply.github.com>
Co-authored-by: Igor Ilic <30923996+dexters1@users.noreply.github.com>
Co-authored-by: Boris <boris@topoteretes.com>
* test: Added test for getting of documents for search
Added test to verify getting documents related to datasets intended for search
Test COG-912
* Structured code summarization (#375)
* feat: turn summarize_code into generator
* feat: extract run_code_graph_pipeline, update the pipeline
* feat: minimal code graph example
* refactor: update argument
* refactor: move run_code_graph_pipeline to cognify/code_graph_pipeline
* refactor: indentation and whitespace nits
* refactor: add deprecated use comments and warnings
* Structured code summarization
* add missing prompt file
* Remove summarization_model argument from summarize_code and fix typehinting
* minor refactors
---------
Co-authored-by: lxobr <122801072+lxobr@users.noreply.github.com>
Co-authored-by: Vasilije <8619304+Vasilije1990@users.noreply.github.com>
Co-authored-by: Igor Ilic <30923996+dexters1@users.noreply.github.com>
Co-authored-by: Boris <boris@topoteretes.com>
* fix: Resolve issue with cognify router graph model default value
Resolve issue with default value for graph model in cognify endpoint
Fix
* chore: Resolve typo in getting documents code
Resolve typo in code
chore COG-912
* Update .github/workflows/dockerhub.yml
Co-authored-by: coderabbitai[bot] <136622811+coderabbitai[bot]@users.noreply.github.com>
* Update .github/workflows/dockerhub.yml
* Update .github/workflows/dockerhub.yml
* Update .github/workflows/dockerhub.yml
* Update get_cognify_router.py
* fix: Resolve syntax issue with cognify router
Resolve syntax issue with cognify router
Fix
* feat: Add ruff pre-commit hook for linting and formatting
Added formatting and linting on pre-commit hook
Feature COG-650
* chore: Update ruff lint options in pyproject file
Update ruff lint options in pyproject file
Chore
* test: Add ruff linter github action
Added linting check with ruff in github actions
Test COG-650
* feat: deletes executor limit from get_repo_file_dependencies
* feat: implements mock feature in LiteLLM engine
* refactor: Remove changes to cognify router
Remove changes to cognify router
Refactor COG-650
* fix: fixing boolean env for github actions
* test: Add test for ruff format for cognee code
Test if code is formatted for cognee
Test COG-650
* refactor: Rename ruff gh actions
Rename ruff gh actions to be more understandable
Refactor COG-650
* chore: Remove checking of ruff lint and format on push
Remove checking of ruff lint and format on push
Chore COG-650
* feat: Add deletion of local files when deleting data
Delete local files when deleting data from cognee
Feature COG-475
* fix: changes back the max workers to 12
* feat: Adds mock summary for codegraph pipeline
* refacotr: Add current development status
Save current development status
Refactor
* Fix langfuse
* Fix langfuse
* Fix langfuse
* Add evaluation notebook
* Rename eval notebook
* chore: Add temporary state of development
Add temp development state to branch
Chore
* fix: Add poetry.lock file, make langfuse mandatory
Added langfuse as mandatory dependency, added poetry.lock file
Fix
* Fix: fixes langfuse config settings
* feat: Add deletion of local files made by cognee through data endpoint
Delete local files made by cognee when deleting data from database through endpoint
Feature COG-475
* test: Revert changes on test_pgvector
Revert changes on test_pgvector which were made to test deletion of local files
Test COG-475
* chore: deletes the old test for the codegraph pipeline
* test: Add test to verify deletion of local files
Added test that checks local files created by cognee will be deleted and those not created by cognee won't
Test COG-475
* chore: deletes unused old version of the codegraph
* chore: deletes unused imports from code_graph_pipeline
* Ingest non-code files
* Fixing review findings
* Ingest non-code files (#395)
* Ingest non-code files
* Fixing review findings
* test: Update test regarding message
Update assertion message, add veryfing of file existence
* Handle retryerrors in code summary (#396)
* Handle retryerrors in code summary
* Log instead of print
* fix: updates the acreate_structured_output
* chore: Add logging to sentry when file which should exist can't be found
Log to sentry that a file which should exist can't be found
Chore COG-475
* Fix diagram
* fix: refactor mcp
* Add Smithery CLI installation instructions and badge
* Move readme
* Update README.md
* Update README.md
* Cog 813 source code chunks (#383)
* fix: pass the list of all CodeFiles to enrichment task
* feat: introduce SourceCodeChunk, update metadata
* feat: get_source_code_chunks code graph pipeline task
* feat: integrate get_source_code_chunks task, comment out summarize_code
* Fix code summarization (#387)
* feat: update data models
* feat: naive parse long strings in source code
* fix: get_non_py_files instead of get_non_code_files
* fix: limit recursion, add comment
* handle embedding empty input error (#398)
* feat: robustly handle CodeFile source code
* refactor: sort imports
* todo: add support for other embedding models
* feat: add custom logger
* feat: add robustness to get_source_code_chunks
Co-authored-by: coderabbitai[bot] <136622811+coderabbitai[bot]@users.noreply.github.com>
* feat: improve embedding exceptions
* refactor: format indents, rename module
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* Fix diagram
* Fix instructions
* adding and fixing files
* Update README.md
* ruff format
* Fix linter issues
* Implement PR review
* Comment out profiling
* fix: add allowed extensions
* fix: adhere UnstructuredDocument.read() to Document
* feat: time code graph run and add mock support
* Fix ollama, work on visualization
* fix: Fixes faulty logging format and sets up error logging in dynamic steps example
* Overcome ContextWindowExceededError by checking token count while chunking (#413)
* fix: Fixes duplicated edges in cognify by limiting the recursion depth in add datapoints
* Adjust AudioDocument and handle None token limit
* Handle azure models as well
* Add clean logging to code graph example
* Remove setting envvars from arg
* fix: fixes create_cognee_style_network_with_logo unit test
* fix: removes accidental remained print
* Get embedding engine instead of passing it. Get it from vector engine instead of direct getter.
* Fix visualization
* Get embedding engine instead of passing it in code chunking.
* Fix poetry issues
* chore: Update version of poetry install action
* chore: Update action to trigger on pull request for any branch
* chore: Remove if in github action to allow triggering on push
* chore: Remove if condition to allow gh actions to trigger on push to PR
* chore: Update poetry version in github actions
* chore: Set fixed ubuntu version to 22.04
* chore: Update py lint to use ubuntu 22.04
* chore: update ubuntu version to 22.04
* feat: implements the first version of graph based completion in search
* chore: Update python 3.9 gh action to use 3.12 instead
* chore: Update formatting of utils.py
* Fix poetry issues
* Adjust integration tests
* fix: Fixes ruff formatting
* Handle circular import
* fix: Resolve profiler issue with partial and recursive logger imports
Resolve issue for profiler with partial and recursive logger imports
* fix: Remove logger from __init__.py file
* test: Test profiling on HEAD branch
* test: Return profiler to base branch
* Set max_tokens in config
* Adjust SWE-bench script to code graph pipeline call
* Adjust SWE-bench script to code graph pipeline call
* fix: Add fix for accessing dictionary elements that don't exits
Using get for the text key instead of direct access to handle situation if the text key doesn't exist
* feat: Add ability to change graph database configuration through cognee
* feat: adds pydantic types to graph layer models
* feat: adds basic retriever for swe bench
* Match Ruff version in config to the one in github actions
* feat: implements code retreiver
* Fix: fixes unit test for codepart search
* Format with Ruff 0.9.0
* Fix: deleting incorrect repo path
* fix: resolve issue with langfuse dependency installation when integrating cognee in different packages
* version: Increase version to 0.1.21
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Co-authored-by: Igor Ilic <igorilic03@gmail.com>
Co-authored-by: Vasilije <8619304+Vasilije1990@users.noreply.github.com>
Co-authored-by: Igor Ilic <30923996+dexters1@users.noreply.github.com>
Co-authored-by: Rita Aleksziev <alekszievr@gmail.com>
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