Commit graph

251 commits

Author SHA1 Message Date
Igor Ilic
67a4d40257 chore: regen poetry lock file 2025-12-05 19:51:26 +01:00
Pavel Zorin
7033b63cd4 update poetry lock 2025-12-04 13:26:53 +01:00
Igor Ilic
2d45db9e0d
Fix distributed issues with latest pydantic version (#1859)
<!-- .github/pull_request_template.md -->

## Description
Resolve distributed issues with poetry lock

## Type of Change
<!-- Please check the relevant option -->
- [ ] Bug fix (non-breaking change that fixes an issue)
- [ ] New feature (non-breaking change that adds functionality)
- [ ] Breaking change (fix or feature that would cause existing
functionality to change)
- [ ] Documentation update
- [ ] Code refactoring
- [ ] Performance improvement
- [ ] Other (please specify):

## Screenshots/Videos (if applicable)
<!-- Add screenshots or videos to help explain your changes -->

## Pre-submission Checklist
<!-- Please check all boxes that apply before submitting your PR -->
- [ ] **I have tested my changes thoroughly before submitting this PR**
- [ ] **This PR contains minimal changes necessary to address the
issue/feature**
- [ ] My code follows the project's coding standards and style
guidelines
- [ ] I have added tests that prove my fix is effective or that my
feature works
- [ ] I have added necessary documentation (if applicable)
- [ ] All new and existing tests pass
- [ ] I have searched existing PRs to ensure this change hasn't been
submitted already
- [ ] I have linked any relevant issues in the description
- [ ] My commits have clear and descriptive messages

## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin.


<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->

## Summary by CodeRabbit

* **Chores**
* Updated dependency version constraints to improve compatibility and
flexibility with Pydantic and aiofiles packages.
* Removed unused development dependency from the project configuration.

<sub>✏️ Tip: You can customize this high-level summary in your review
settings.</sub>

<!-- end of auto-generated comment: release notes by coderabbit.ai -->
2025-12-02 16:08:26 +01:00
hajdul88
c2c64a417c
fix: fixes ontology api endpoint tests + poetry lock(#1824)
<!-- .github/pull_request_template.md -->

## Description

This PR fixes the failing CI tests related to the new ontology api
endpoint.


<!--
Please provide a clear, human-generated description of the changes in
this PR.
DO NOT use AI-generated descriptions. We want to understand your thought
process and reasoning.
-->

## Type of Change
<!-- Please check the relevant option -->
- [x] Bug fix (non-breaking change that fixes an issue)
- [ ] New feature (non-breaking change that adds functionality)
- [ ] Breaking change (fix or feature that would cause existing
functionality to change)
- [ ] Documentation update
- [ ] Code refactoring
- [ ] Performance improvement
- [ ] Other (please specify):

## Screenshots/Videos (if applicable)
<!-- Add screenshots or videos to help explain your changes -->

## Pre-submission Checklist
<!-- Please check all boxes that apply before submitting your PR -->
- [x] **I have tested my changes thoroughly before submitting this PR**
- [x] **This PR contains minimal changes necessary to address the
issue/feature**
- [x] My code follows the project's coding standards and style
guidelines
- [x] I have added tests that prove my fix is effective or that my
feature works
- [x] I have added necessary documentation (if applicable)
- [x] All new and existing tests pass
- [x] I have searched existing PRs to ensure this change hasn't been
submitted already
- [x] I have linked any relevant issues in the description
- [x] My commits have clear and descriptive messages

## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin.
2025-11-24 17:44:51 +01:00
Boris Arzentar
af8c55e82b
version: 0.5.0.dev0 2025-11-24 16:16:47 +01:00
Daulet Amirkhanov
056424f244
feat: fs-cache (#1645)
<!-- .github/pull_request_template.md -->

## Description
<!--
Please provide a clear, human-generated description of the changes in
this PR.
DO NOT use AI-generated descriptions. We want to understand your thought
process and reasoning.
-->

Implement File-Based Version of the Redis Cache Adapter

Description and acceptance criteria:

This PR introduces a file-based cache adapter as an alternative to the
existing Redis-based adapter. It provides the same core functionality
for caching session data and maintaining context across multiple user
interactions but stores data locally in files instead of Redis.

Because the shared Kùzu lock mechanism relies on Redis, it is not
supported in this implementation. If a lock is configured, the adapter
will raise an error to prevent misconfiguration.

You can test this adapter by enabling caching with the following
settings:

caching=True
cache_backend="fs"

When running multiple searches in a session, the system should correctly
maintain conversational context. For example:

- What is XY?
- Are you sure?
- What was my first question?

In this case, the adapter should preserve previous user–Cognee
interactions within the cache file so that follow-up queries remain
context-aware.


## Type of Change
<!-- Please check the relevant option -->
- [ ] Bug fix (non-breaking change that fixes an issue)
- [x] New feature (non-breaking change that adds functionality)
- [ ] Breaking change (fix or feature that would cause existing
functionality to change)
- [ ] Documentation update
- [ ] Code refactoring
- [ ] Performance improvement
- [ ] Other (please specify):

## Screenshots/Videos (if applicable)
<!-- Add screenshots or videos to help explain your changes -->

## Pre-submission Checklist
<!-- Please check all boxes that apply before submitting your PR -->
- [x] **I have tested my changes thoroughly before submitting this PR**
- [x] **This PR contains minimal changes necessary to address the
issue/feature**
- [x] My code follows the project's coding standards and style
guidelines
- [x] I have added tests that prove my fix is effective or that my
feature works
- [x] I have added necessary documentation (if applicable)
- [x] All new and existing tests pass
- [x] I have searched existing PRs to ensure this change hasn't been
submitted already
- [x] I have linked any relevant issues in the description
- [x] My commits have clear and descriptive messages

## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin.

---------

Co-authored-by: Vasilije <8619304+Vasilije1990@users.noreply.github.com>
Co-authored-by: hajdul88 <52442977+hajdul88@users.noreply.github.com>
2025-11-12 15:34:30 +01:00
Igor Ilic
b2641b45cd chore: Update version and lock files 2025-10-27 16:52:53 +01:00
vasilije
1f49ca265f added lock file 2025-10-22 22:24:04 +02:00
Daulet Amirkhanov
aa6df96066 update poetry.lock 2025-10-22 20:56:25 +01:00
hajdul88
8d9ee07083 chore: regenerating lock files 2025-10-22 15:31:57 +02:00
vasilije
cbfa360b8f added lock file 2025-10-19 15:26:06 +02:00
hajdul88
9821a01a47
feat: Redis lock integration and Kuzu agentic access fix (#1504)
<!-- .github/pull_request_template.md -->

## Description
This PR introduces a shared locked mechanism in KuzuAdapter to avoid use
case when multiple subprocesses from different environments are trying
to use the same Kuzu adatabase.

## Type of Change
<!-- Please check the relevant option -->
- [ ] Bug fix (non-breaking change that fixes an issue)
- [x] New feature (non-breaking change that adds functionality)
- [ ] Breaking change (fix or feature that would cause existing
functionality to change)
- [ ] Documentation update
- [ ] Code refactoring
- [x] Performance improvement
- [ ] Other (please specify):

## Screenshots/Videos (if applicable)
None

## Pre-submission Checklist
<!-- Please check all boxes that apply before submitting your PR -->
- [x] **I have tested my changes thoroughly before submitting this PR**
- [x] **This PR contains minimal changes necessary to address the
issue/feature**
- [x] My code follows the project's coding standards and style
guidelines
- [x] I have added tests that prove my fix is effective or that my
feature works
- [x] I have added necessary documentation (if applicable)
- [x] All new and existing tests pass
- [x] I have searched existing PRs to ensure this change hasn't been
submitted already
- [x] I have linked any relevant issues in the description
- [x] My commits have clear and descriptive messages

## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin.
2025-10-16 15:48:20 +02:00
Daulet Amirkhanov
3fb241bd23 Merge remote-tracking branch 'origin/main' into merge-main-into-dev 2025-10-14 13:34:29 +01:00
Igor Ilic
255def5ba9 chore: Update poetry lock 2025-10-14 13:38:41 +02:00
vasilije
694ed54d07 regen lock 2025-10-12 11:41:18 +02:00
Igor Ilic
2b04a35309
chore: Update lock files (#1511)
<!-- .github/pull_request_template.md -->

## Description
update lock files

## Type of Change
<!-- Please check the relevant option -->
- [ ] Bug fix (non-breaking change that fixes an issue)
- [ ] New feature (non-breaking change that adds functionality)
- [ ] Breaking change (fix or feature that would cause existing
functionality to change)
- [ ] Documentation update
- [ ] Code refactoring
- [ ] Performance improvement
- [ ] Other (please specify):

## Screenshots/Videos (if applicable)
<!-- Add screenshots or videos to help explain your changes -->

## Pre-submission Checklist
<!-- Please check all boxes that apply before submitting your PR -->
- [ ] **I have tested my changes thoroughly before submitting this PR**
- [ ] **This PR contains minimal changes necessary to address the
issue/feature**
- [ ] My code follows the project's coding standards and style
guidelines
- [ ] I have added tests that prove my fix is effective or that my
feature works
- [ ] I have added necessary documentation (if applicable)
- [ ] All new and existing tests pass
- [ ] I have searched existing PRs to ensure this change hasn't been
submitted already
- [ ] I have linked any relevant issues in the description
- [ ] My commits have clear and descriptive messages

## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin.
2025-10-07 21:16:43 +02:00
Igor Ilic
e7709f7bd0
fix: Resolve issue with Kuzu graph database persistence on our local … (#1490)
…Docker

<!-- .github/pull_request_template.md -->

## Description
Resolves issue with kuzu graph data persistence for Cognee backend
docker

## Type of Change
<!-- Please check the relevant option -->
- [x] Bug fix (non-breaking change that fixes an issue)
- [ ] New feature (non-breaking change that adds functionality)
- [ ] Breaking change (fix or feature that would cause existing
functionality to change)
- [ ] Documentation update
- [ ] Code refactoring
- [ ] Performance improvement
- [ ] Other (please specify):

## Pre-submission Checklist
<!-- Please check all boxes that apply before submitting your PR -->
- [ ] **I have tested my changes thoroughly before submitting this PR**
- [ ] **This PR contains minimal changes necessary to address the
issue/feature**
- [ ] My code follows the project's coding standards and style
guidelines
- [ ] I have added tests that prove my fix is effective or that my
feature works
- [ ] I have added necessary documentation (if applicable)
- [ ] All new and existing tests pass
- [ ] I have searched existing PRs to ensure this change hasn't been
submitted already
- [ ] I have linked any relevant issues in the description
- [ ] My commits have clear and descriptive messages

## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin.

---------

Co-authored-by: Boris <boris@topoteretes.com>
2025-10-07 20:38:43 +02:00
Igor Ilic
38cdacbcb6
fix: Resolve issue with Gemini adapter (#1494)
<!-- .github/pull_request_template.md -->

## Description
Resolve Gemini Adapter issues:
 1. resolve embedding batch issue,
2. Resolve slowness because gemini tokenizer was sending word per word
to Googles API to count tokens (using OpenAI's local tokenizer to count
tokens for Gemini now)
 3. Update deprecated library and move to instructor

## Type of Change
<!-- Please check the relevant option -->
- [x] Bug fix (non-breaking change that fixes an issue)
- [ ] New feature (non-breaking change that adds functionality)
- [ ] Breaking change (fix or feature that would cause existing
functionality to change)
- [ ] Documentation update
- [ ] Code refactoring
- [ ] Performance improvement
- [ ] Other (please specify):

## Pre-submission Checklist
<!-- Please check all boxes that apply before submitting your PR -->
- [ ] **I have tested my changes thoroughly before submitting this PR**
- [ ] **This PR contains minimal changes necessary to address the
issue/feature**
- [ ] My code follows the project's coding standards and style
guidelines
- [ ] I have added tests that prove my fix is effective or that my
feature works
- [ ] I have added necessary documentation (if applicable)
- [ ] All new and existing tests pass
- [ ] I have searched existing PRs to ensure this change hasn't been
submitted already
- [ ] I have linked any relevant issues in the description
- [ ] My commits have clear and descriptive messages

## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin.
2025-10-07 18:04:18 +02:00
EricXiao
4938ad9fe9 Merge branch 'dev' into feat/add-pdfproloader
Signed-off-by: EricXiao <taoiaox@gmail.com>
2025-09-30 17:08:28 +08:00
Igor Ilic
5528097e29 Merge branch 'main' into merge-main-vol6 2025-09-27 00:06:33 +02:00
Boris Arzentar
1deab2d54e
fix: limit onnxruntime version 2025-09-26 09:57:53 +02:00
Igor Ilic
f2edfaa9b9 refactor: Add scikit learn for evals 2025-09-25 17:23:14 +02:00
Igor Ilic
88655031ff chore: Remove scikit dependency 2025-09-25 17:14:56 +02:00
Igor Ilic
71e1070820 Merge branch 'dev' into pylance-fix 2025-09-25 17:08:28 +02:00
Igor Ilic
bb0ae06a0a Merge branch 'dev' of github.com:topoteretes/cognee into dev 2025-09-25 17:04:50 +02:00
Igor Ilic
bcc1747ab8 chore: resolve ruff v0.13.2 support issue 2025-09-25 17:02:58 +02:00
Igor Ilic
cf3f5945e7 chore: Limit pylance to 0.36 for MacOS13 2025-09-25 16:44:55 +02:00
Igor Ilic
61ef6fa444 chore: Update pyproject 2025-09-25 15:26:10 +02:00
Igor Ilic
8cbc3eb877 Merge branch 'dev' into COG-2826 2025-09-25 13:31:21 +02:00
Igor Ilic
49fd2ab4bd chore: Update lock files 2025-09-23 19:26:09 +02:00
EricXiao
86d40f1db9 Merge branch 'dev' into feat/add-pdfproloader
Signed-off-by: EricXiao <taoiaox@gmail.com>
2025-09-22 21:00:23 +08:00
Igor Ilic
023f5ea632 Merge branch 'dev' into baml-refactor 2025-09-22 11:25:59 +02:00
EricXiao
7fae75d020 make advanced pdf loader optional
Signed-off-by: EricXiao <taoiaox@gmail.com>
2025-09-22 15:07:58 +08:00
EricXiao
6107cb47ca Implement Advanced PDF Loader with unstructured library support
- Added AdvancedPdfLoader class for enhanced PDF processing using the unstructured library.
- Integrated fallback mechanism to PyPdfLoader in case of unstructured library import failure or exceptions.
- Updated supported loaders to include AdvancedPdfLoader.
- Added unit tests for AdvancedPdfLoader to ensure functionality and error handling.
- Updated poetry.lock and pyproject.toml to include new dependencies and versions.

Signed-off-by: EricXiao <taoiaox@gmail.com>
2025-09-20 17:03:00 +08:00
Boris
7f775ace7c
Merge dev into main (#1422)
<!-- .github/pull_request_template.md -->

## Description
<!-- 
Please provide a clear, human-generated description of the changes in
this PR.
DO NOT use AI-generated descriptions. We want to understand your thought
process and reasoning.
-->

## Type of Change
<!-- Please check the relevant option -->
- [ ] Bug fix (non-breaking change that fixes an issue)
- [ ] New feature (non-breaking change that adds functionality)
- [ ] Breaking change (fix or feature that would cause existing
functionality to change)
- [ ] Documentation update
- [ ] Code refactoring
- [ ] Performance improvement
- [ ] Other (please specify):

## Changes Made
<!-- List the specific changes made in this PR -->
- 
- 
- 

## Testing
<!-- Describe how you tested your changes -->

## Screenshots/Videos (if applicable)
<!-- Add screenshots or videos to help explain your changes -->

## Pre-submission Checklist
<!-- Please check all boxes that apply before submitting your PR -->
- [ ] **I have tested my changes thoroughly before submitting this PR**
- [ ] **This PR contains minimal changes necessary to address the
issue/feature**
- [ ] My code follows the project's coding standards and style
guidelines
- [ ] I have added tests that prove my fix is effective or that my
feature works
- [ ] I have added necessary documentation (if applicable)
- [ ] All new and existing tests pass
- [ ] I have searched existing PRs to ensure this change hasn't been
submitted already
- [ ] I have linked any relevant issues in the description
- [ ] My commits have clear and descriptive messages

## Related Issues
<!-- Link any related issues using "Fixes #issue_number" or "Relates to
#issue_number" -->

## Additional Notes
<!-- Add any additional notes, concerns, or context for reviewers -->

## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin.

---------

Co-authored-by: Igor Ilic <igorilic03@gmail.com>
Co-authored-by: Igor Ilic <30923996+dexters1@users.noreply.github.com>
Co-authored-by: hajdul88 <52442977+hajdul88@users.noreply.github.com>
Co-authored-by: Gao,Wei <kaovip@gmail.com>
Co-authored-by: Vasilije <8619304+Vasilije1990@users.noreply.github.com>
Co-authored-by: Andrej Milicevic <milicevicandrej@yahoo.com>
2025-09-17 10:32:10 +02:00
Boris
fc49725126
chore: update lock files (#1423)
<!-- .github/pull_request_template.md -->

## Description
<!-- 
Please provide a clear, human-generated description of the changes in
this PR.
DO NOT use AI-generated descriptions. We want to understand your thought
process and reasoning.
-->

## Type of Change
<!-- Please check the relevant option -->
- [ ] Bug fix (non-breaking change that fixes an issue)
- [ ] New feature (non-breaking change that adds functionality)
- [ ] Breaking change (fix or feature that would cause existing
functionality to change)
- [ ] Documentation update
- [ ] Code refactoring
- [ ] Performance improvement
- [ ] Other (please specify):

## Changes Made
<!-- List the specific changes made in this PR -->
- 
- 
- 

## Testing
<!-- Describe how you tested your changes -->

## Screenshots/Videos (if applicable)
<!-- Add screenshots or videos to help explain your changes -->

## Pre-submission Checklist
<!-- Please check all boxes that apply before submitting your PR -->
- [ ] **I have tested my changes thoroughly before submitting this PR**
- [ ] **This PR contains minimal changes necessary to address the
issue/feature**
- [ ] My code follows the project's coding standards and style
guidelines
- [ ] I have added tests that prove my fix is effective or that my
feature works
- [ ] I have added necessary documentation (if applicable)
- [ ] All new and existing tests pass
- [ ] I have searched existing PRs to ensure this change hasn't been
submitted already
- [ ] I have linked any relevant issues in the description
- [ ] My commits have clear and descriptive messages

## Related Issues
<!-- Link any related issues using "Fixes #issue_number" or "Relates to
#issue_number" -->

## Additional Notes
<!-- Add any additional notes, concerns, or context for reviewers -->

## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin.
2025-09-16 23:58:52 +02:00
Igor Ilic
f8d0380c62 chore: Update cognee version 2025-09-11 21:58:16 +02:00
Igor Ilic
236776a69f refactor: Update baml client 2025-09-08 16:36:28 +02:00
Vasilije
10b18e5782
Merge branch 'dev' into COG-2826 2025-09-02 22:51:01 +02:00
Igor Ilic
fc06256b7e feat: Add low reasoning for gpt5 model 2025-08-29 17:59:29 +02:00
vasilije
c85302f467 added lancedb pandas removal 2025-08-27 19:42:30 +02:00
Igor Ilic
1f2809a2e1 chore: Update lock files 2025-08-27 17:40:25 +02:00
Igor Ilic
d4ce0e18fd Merge branch 'main' into merge-main-vol-6 2025-08-27 14:21:25 +02:00
Igor Ilic
ecc403e49c fix: Add binary for python magic for windows os 2025-08-27 12:05:57 +02:00
vasilije
13e3e3b605 added fix 2025-08-18 22:37:40 +02:00
vasilije
9a17aa73b9 added fix 2025-08-18 22:16:44 +02:00
hajdul88
4d021ec970
chore: fix openai version (#1266)
<!-- .github/pull_request_template.md -->

## Description
Fixes openai version

## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin.
2025-08-18 18:33:56 +02:00
vasilije
3223737a2d add fix 2025-08-18 17:53:20 +02:00
vasilije
693c8831fe updated deepeval 2025-08-17 13:05:19 +02:00
Igor Ilic
741188f788
Main merge vol5 (#1252)
<!-- .github/pull_request_template.md -->

## Description
<!-- Provide a clear description of the changes in this PR -->

## DCO Affirmation
I affirm that all code in every commit of this pull request conforms to
the terms of the Topoteretes Developer Certificate of Origin.

---------

Signed-off-by: Emmanuel Ferdman <emmanuelferdman@gmail.com>
Co-authored-by: Pavel Zorin <pazonec@yandex.ru>
Co-authored-by: Emmanuel Ferdman <emmanuelferdman@gmail.com>
Co-authored-by: Vasilije <8619304+Vasilije1990@users.noreply.github.com>
Co-authored-by: Copilot Autofix powered by AI <62310815+github-advanced-security[bot]@users.noreply.github.com>
2025-08-14 21:17:17 +02:00