* filter out empty node names * Update graphiti_core/utils/maintenance/node_operations.py Co-authored-by: ellipsis-dev[bot] <65095814+ellipsis-dev[bot]@users.noreply.github.com> --------- Co-authored-by: ellipsis-dev[bot] <65095814+ellipsis-dev[bot]@users.noreply.github.com>
463 lines
15 KiB
Python
463 lines
15 KiB
Python
"""
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Copyright 2024, Zep Software, Inc.
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Licensed under the Apache License, Version 2.0 (the "License");
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you may not use this file except in compliance with the License.
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You may obtain a copy of the License at
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http://www.apache.org/licenses/LICENSE-2.0
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Unless required by applicable law or agreed to in writing, software
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distributed under the License is distributed on an "AS IS" BASIS,
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WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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See the License for the specific language governing permissions and
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limitations under the License.
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"""
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import logging
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from contextlib import suppress
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from time import time
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from typing import Any
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import pydantic
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from pydantic import BaseModel, Field
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from graphiti_core.graphiti_types import GraphitiClients
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from graphiti_core.helpers import MAX_REFLEXION_ITERATIONS, semaphore_gather
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from graphiti_core.llm_client import LLMClient
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from graphiti_core.nodes import EntityNode, EpisodeType, EpisodicNode, create_entity_node_embeddings
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from graphiti_core.prompts import prompt_library
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from graphiti_core.prompts.dedupe_nodes import NodeDuplicate
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from graphiti_core.prompts.extract_nodes import (
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ExtractedEntities,
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ExtractedEntity,
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MissedEntities,
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)
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from graphiti_core.search.search_filters import SearchFilters
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from graphiti_core.search.search_utils import get_relevant_nodes
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from graphiti_core.utils.datetime_utils import utc_now
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logger = logging.getLogger(__name__)
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async def extract_nodes_reflexion(
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llm_client: LLMClient,
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episode: EpisodicNode,
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previous_episodes: list[EpisodicNode],
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node_names: list[str],
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) -> list[str]:
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# Prepare context for LLM
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context = {
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'episode_content': episode.content,
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'previous_episodes': [ep.content for ep in previous_episodes],
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'extracted_entities': node_names,
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}
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llm_response = await llm_client.generate_response(
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prompt_library.extract_nodes.reflexion(context), MissedEntities
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)
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missed_entities = llm_response.get('missed_entities', [])
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return missed_entities
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async def extract_nodes(
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clients: GraphitiClients,
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episode: EpisodicNode,
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previous_episodes: list[EpisodicNode],
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entity_types: dict[str, BaseModel] | None = None,
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) -> list[EntityNode]:
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start = time()
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llm_client = clients.llm_client
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embedder = clients.embedder
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llm_response = {}
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custom_prompt = ''
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entities_missed = True
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reflexion_iterations = 0
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entity_types_context = [
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{
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'entity_type_id': 0,
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'entity_type_name': 'Entity',
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'entity_type_description': 'Default entity classification. Use this entity type if the entity is not one of the other listed types.',
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}
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]
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entity_types_context += (
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[
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{
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'entity_type_id': i + 1,
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'entity_type_name': type_name,
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'entity_type_description': type_model.__doc__,
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}
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for i, (type_name, type_model) in enumerate(entity_types.items())
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]
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if entity_types is not None
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else []
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)
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context = {
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'episode_content': episode.content,
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'episode_timestamp': episode.valid_at.isoformat(),
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'previous_episodes': [ep.content for ep in previous_episodes],
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'custom_prompt': custom_prompt,
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'entity_types': entity_types_context,
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'source_description': episode.source_description,
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}
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while entities_missed and reflexion_iterations <= MAX_REFLEXION_ITERATIONS:
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if episode.source == EpisodeType.message:
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llm_response = await llm_client.generate_response(
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prompt_library.extract_nodes.extract_message(context),
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response_model=ExtractedEntities,
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)
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elif episode.source == EpisodeType.text:
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llm_response = await llm_client.generate_response(
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prompt_library.extract_nodes.extract_text(context), response_model=ExtractedEntities
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)
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elif episode.source == EpisodeType.json:
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llm_response = await llm_client.generate_response(
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prompt_library.extract_nodes.extract_json(context), response_model=ExtractedEntities
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)
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extracted_entities: list[ExtractedEntity] = [
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ExtractedEntity(**entity_types_context)
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for entity_types_context in llm_response.get('extracted_entities', [])
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]
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reflexion_iterations += 1
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if reflexion_iterations < MAX_REFLEXION_ITERATIONS:
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missing_entities = await extract_nodes_reflexion(
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llm_client,
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episode,
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previous_episodes,
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[entity.name for entity in extracted_entities],
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)
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entities_missed = len(missing_entities) != 0
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custom_prompt = 'Make sure that the following entities are extracted: '
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for entity in missing_entities:
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custom_prompt += f'\n{entity},'
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filtered_extracted_entities = [entity for entity in extracted_entities if entity.name.strip()]
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end = time()
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logger.debug(f'Extracted new nodes: {filtered_extracted_entities} in {(end - start) * 1000} ms')
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# Convert the extracted data into EntityNode objects
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extracted_nodes = []
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for extracted_entity in filtered_extracted_entities:
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entity_type_name = entity_types_context[extracted_entity.entity_type_id].get(
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'entity_type_name'
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)
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labels: list[str] = list({'Entity', str(entity_type_name)})
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new_node = EntityNode(
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name=extracted_entity.name,
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group_id=episode.group_id,
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labels=labels,
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summary='',
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created_at=utc_now(),
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)
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extracted_nodes.append(new_node)
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logger.debug(f'Created new node: {new_node.name} (UUID: {new_node.uuid})')
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await create_entity_node_embeddings(embedder, extracted_nodes)
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logger.debug(f'Extracted nodes: {[(n.name, n.uuid) for n in extracted_nodes]}')
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return extracted_nodes
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async def dedupe_extracted_nodes(
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llm_client: LLMClient,
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extracted_nodes: list[EntityNode],
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existing_nodes: list[EntityNode],
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) -> tuple[list[EntityNode], dict[str, str]]:
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start = time()
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# build existing node map
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node_map: dict[str, EntityNode] = {}
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for node in existing_nodes:
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node_map[node.uuid] = node
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# Prepare context for LLM
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existing_nodes_context = [
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{'uuid': node.uuid, 'name': node.name, 'summary': node.summary} for node in existing_nodes
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]
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extracted_nodes_context = [
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{'uuid': node.uuid, 'name': node.name, 'summary': node.summary} for node in extracted_nodes
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]
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context = {
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'existing_nodes': existing_nodes_context,
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'extracted_nodes': extracted_nodes_context,
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}
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llm_response = await llm_client.generate_response(prompt_library.dedupe_nodes.node(context))
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duplicate_data = llm_response.get('duplicates', [])
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end = time()
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logger.debug(f'Deduplicated nodes: {duplicate_data} in {(end - start) * 1000} ms')
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uuid_map: dict[str, str] = {}
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for duplicate in duplicate_data:
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uuid_value = duplicate['duplicate_of']
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uuid_map[duplicate['uuid']] = uuid_value
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nodes: list[EntityNode] = []
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for node in extracted_nodes:
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if node.uuid in uuid_map:
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existing_uuid = uuid_map[node.uuid]
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existing_node = node_map[existing_uuid]
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nodes.append(existing_node)
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else:
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nodes.append(node)
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return nodes, uuid_map
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async def resolve_extracted_nodes(
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clients: GraphitiClients,
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extracted_nodes: list[EntityNode],
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episode: EpisodicNode | None = None,
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previous_episodes: list[EpisodicNode] | None = None,
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entity_types: dict[str, BaseModel] | None = None,
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) -> tuple[list[EntityNode], dict[str, str]]:
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llm_client = clients.llm_client
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driver = clients.driver
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# Find relevant nodes already in the graph
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existing_nodes_lists: list[list[EntityNode]] = await get_relevant_nodes(
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driver, extracted_nodes, SearchFilters()
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)
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resolved_nodes: list[EntityNode] = await semaphore_gather(
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*[
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resolve_extracted_node(
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llm_client,
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extracted_node,
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existing_nodes,
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episode,
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previous_episodes,
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entity_types.get(
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next((item for item in extracted_node.labels if item != 'Entity'), '')
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)
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if entity_types is not None
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else None,
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)
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for extracted_node, existing_nodes in zip(
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extracted_nodes, existing_nodes_lists, strict=True
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)
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]
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)
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uuid_map: dict[str, str] = {}
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for extracted_node, resolved_node in zip(extracted_nodes, resolved_nodes, strict=True):
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uuid_map[extracted_node.uuid] = resolved_node.uuid
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logger.debug(f'Resolved nodes: {[(n.name, n.uuid) for n in resolved_nodes]}')
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return resolved_nodes, uuid_map
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async def resolve_extracted_node(
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llm_client: LLMClient,
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extracted_node: EntityNode,
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existing_nodes: list[EntityNode],
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episode: EpisodicNode | None = None,
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previous_episodes: list[EpisodicNode] | None = None,
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entity_type: BaseModel | None = None,
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) -> EntityNode:
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start = time()
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if len(existing_nodes) == 0:
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return extracted_node
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# Prepare context for LLM
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existing_nodes_context = [
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{
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**{
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'id': i,
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'name': node.name,
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'entity_types': node.labels,
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'summary': node.summary,
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},
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**node.attributes,
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}
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for i, node in enumerate(existing_nodes)
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]
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extracted_node_context = {
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'name': extracted_node.name,
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'entity_type': entity_type.__name__ if entity_type is not None else 'Entity', # type: ignore
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'entity_type_description': entity_type.__doc__
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if entity_type is not None
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else 'Default Entity Type',
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}
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context = {
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'existing_nodes': existing_nodes_context,
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'extracted_node': extracted_node_context,
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'episode_content': episode.content if episode is not None else '',
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'previous_episodes': [ep.content for ep in previous_episodes]
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if previous_episodes is not None
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else [],
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}
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llm_response = await llm_client.generate_response(
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prompt_library.dedupe_nodes.node(context), response_model=NodeDuplicate
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)
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duplicate_id: int = llm_response.get('duplicate_node_id', -1)
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node = (
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existing_nodes[duplicate_id] if 0 <= duplicate_id < len(existing_nodes) else extracted_node
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)
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end = time()
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logger.debug(
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f'Resolved node: {extracted_node.name} is {node.name}, in {(end - start) * 1000} ms'
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)
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return node
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async def extract_attributes_from_nodes(
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clients: GraphitiClients,
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nodes: list[EntityNode],
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episode: EpisodicNode | None = None,
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previous_episodes: list[EpisodicNode] | None = None,
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entity_types: dict[str, BaseModel] | None = None,
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) -> list[EntityNode]:
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llm_client = clients.llm_client
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embedder = clients.embedder
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updated_nodes: list[EntityNode] = await semaphore_gather(
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*[
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extract_attributes_from_node(
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llm_client,
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node,
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episode,
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previous_episodes,
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entity_types.get(next((item for item in node.labels if item != 'Entity'), ''))
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if entity_types is not None
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else None,
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)
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for node in nodes
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]
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)
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await create_entity_node_embeddings(embedder, updated_nodes)
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return updated_nodes
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async def extract_attributes_from_node(
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llm_client: LLMClient,
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node: EntityNode,
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episode: EpisodicNode | None = None,
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previous_episodes: list[EpisodicNode] | None = None,
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entity_type: BaseModel | None = None,
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) -> EntityNode:
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node_context: dict[str, Any] = {
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'name': node.name,
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'summary': node.summary,
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'entity_types': node.labels,
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'attributes': node.attributes,
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}
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attributes_definitions: dict[str, Any] = {
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'summary': (
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str,
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Field(
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description='Summary containing the important information about the entity. Under 200 words',
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),
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),
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'name': (
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str,
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Field(description='Name of the ENTITY'),
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),
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}
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if entity_type is not None:
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for field_name, field_info in entity_type.model_fields.items():
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attributes_definitions[field_name] = (
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field_info.annotation,
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Field(description=field_info.description),
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)
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entity_attributes_model = pydantic.create_model('EntityAttributes', **attributes_definitions)
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summary_context: dict[str, Any] = {
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'node': node_context,
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'episode_content': episode.content if episode is not None else '',
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'previous_episodes': [ep.content for ep in previous_episodes]
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if previous_episodes is not None
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else [],
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}
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llm_response = await llm_client.generate_response(
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prompt_library.extract_nodes.extract_attributes(summary_context),
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response_model=entity_attributes_model,
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)
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node.summary = llm_response.get('summary', node.summary)
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node.name = llm_response.get('name', node.name)
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node_attributes = {key: value for key, value in llm_response.items()}
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with suppress(KeyError):
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del node_attributes['summary']
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del node_attributes['name']
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node.attributes.update(node_attributes)
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return node
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async def dedupe_node_list(
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llm_client: LLMClient,
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nodes: list[EntityNode],
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) -> tuple[list[EntityNode], dict[str, str]]:
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start = time()
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# build node map
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node_map = {}
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for node in nodes:
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node_map[node.uuid] = node
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# Prepare context for LLM
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nodes_context = [
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{'uuid': node.uuid, 'name': node.name, 'summary': node.summary}.update(node.attributes)
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for node in nodes
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]
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context = {
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'nodes': nodes_context,
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}
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llm_response = await llm_client.generate_response(
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prompt_library.dedupe_nodes.node_list(context)
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)
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nodes_data = llm_response.get('nodes', [])
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end = time()
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logger.debug(f'Deduplicated nodes: {nodes_data} in {(end - start) * 1000} ms')
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# Get full node data
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unique_nodes = []
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uuid_map: dict[str, str] = {}
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for node_data in nodes_data:
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node_instance: EntityNode | None = node_map.get(node_data['uuids'][0])
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if node_instance is None:
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logger.warning(f'Node {node_data["uuids"][0]} not found in node map')
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continue
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node_instance.summary = node_data['summary']
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unique_nodes.append(node_instance)
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for uuid in node_data['uuids'][1:]:
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uuid_value = node_map[node_data['uuids'][0]].uuid
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uuid_map[uuid] = uuid_value
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return unique_nodes, uuid_map
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