Bulk add nodes and edges (#205)

* test

* only use parallel runtime if set to true

* add and test bulk add

* remove group_ids

* format

* bump version

* update readme

README.md

@@ -173,6 +173,17 @@ The `server` directory contains an API service for interacting with the Graphiti
 
 Please see the [server README](./server/README.md) for more information.
 
+## Optional Environment Variables
+
+In addition to the Neo4j and OpenAi-compatible credentials, Graphiti also has a few optional environment variables.
+If you are using one of our supported models, such as Anthropic or Voyage models, the necessary environment variables
+must be set.
+
+`USE_PARALLEL_RUNTIME` is an optional boolean variable that can be set to true if you wish
+to enable Neo4j's parallel runtime feature for several of our search queries.
+Note that this feature is not supported for Neo4j Community edition or for smaller AuraDB instances,
+as such this feature is off by default.
+
 ## Documentation
 
 - [Guides and API documentation](https://help.getzep.com/graphiti).
@@ -186,11 +197,11 @@ Graphiti is under active development. We aim to maintain API stability while wor
 - [x] Implementing node and edge CRUD operations
 - [ ] Improving performance and scalability
 - [ ] Achieving good performance with different LLM and embedding models
-- [ ] Creating a dedicated embedder interface
+- [x] Creating a dedicated embedder interface
 - [ ] Supporting custom graph schemas:
     - Allow developers to provide their own defined node and edge classes when ingesting episodes
     - Enable more flexible knowledge representation tailored to specific use cases
-- [ ] Enhancing retrieval capabilities with more robust and configurable options
+- [x] Enhancing retrieval capabilities with more robust and configurable options
 - [ ] Expanding test coverage to ensure reliability and catch edge cases
 
 ## Contributing

graphiti_core/graphiti.py

@@ -51,6 +51,7 @@ from graphiti_core.utils import (
 )
 from graphiti_core.utils.bulk_utils import (
     RawEpisode,
+    add_nodes_and_edges_bulk,
     dedupe_edges_bulk,
     dedupe_nodes_bulk,
     extract_edge_dates_bulk,
@@ -451,10 +452,9 @@ class Graphiti:
             if not self.store_raw_episode_content:
                 episode.content = ''
 
-            await episode.save(self.driver)
-            await asyncio.gather(*[node.save(self.driver) for node in nodes])
-            await asyncio.gather(*[edge.save(self.driver) for edge in episodic_edges])
-            await asyncio.gather(*[edge.save(self.driver) for edge in entity_edges])
+            await add_nodes_and_edges_bulk(
+                self.driver, [episode], episodic_edges, nodes, entity_edges
+            )
 
             # Update any communities
             if update_communities:

graphiti_core/helpers.py

@@ -24,6 +24,7 @@ from neo4j import time as neo4j_time
 load_dotenv()
 
 DEFAULT_DATABASE = os.getenv('DEFAULT_DATABASE', None)
+USE_PARALLEL_RUNTIME = bool(os.getenv('USE_PARALLEL_RUNTIME', False))
 
 
 def parse_db_date(neo_date: neo4j_time.DateTime | None) -> datetime | None:

graphiti_core/models/edges/edge_db_queries.py

@@ -5,6 +5,15 @@ EPISODIC_EDGE_SAVE = """
         SET r = {uuid: $uuid, group_id: $group_id, created_at: $created_at}
         RETURN r.uuid AS uuid"""
 
+EPISODIC_EDGE_SAVE_BULK = """
+    UNWIND $episodic_edges AS edge
+    MATCH (episode:Episodic {uuid: edge.source_node_uuid}) 
+    MATCH (node:Entity {uuid: edge.target_node_uuid}) 
+    MERGE (episode)-[r:MENTIONS {uuid: edge.uuid}]->(node)
+    SET r = {uuid: edge.uuid, group_id: edge.group_id, created_at: edge.created_at}
+    RETURN r.uuid AS uuid
+"""
+
 ENTITY_EDGE_SAVE = """
         MATCH (source:Entity {uuid: $source_uuid}) 
         MATCH (target:Entity {uuid: $target_uuid}) 
@@ -14,6 +23,17 @@ ENTITY_EDGE_SAVE = """
         WITH r CALL db.create.setRelationshipVectorProperty(r, "fact_embedding", $fact_embedding)
         RETURN r.uuid AS uuid"""
 
+ENTITY_EDGE_SAVE_BULK = """
+    UNWIND $entity_edges AS edge
+    MATCH (source:Entity {uuid: edge.source_node_uuid}) 
+    MATCH (target:Entity {uuid: edge.target_node_uuid}) 
+    MERGE (source)-[r:RELATES_TO {uuid: edge.uuid}]->(target)
+    SET r = {uuid: edge.uuid, name: edge.name, group_id: edge.group_id, fact: edge.fact, episodes: edge.episodes, 
+    created_at: edge.created_at, expired_at: edge.expired_at, valid_at: edge.valid_at, invalid_at: edge.invalid_at}
+    WITH r, edge CALL db.create.setRelationshipVectorProperty(r, "fact_embedding", edge.fact_embedding)
+    RETURN r.uuid AS uuid
+"""
+
 COMMUNITY_EDGE_SAVE = """
         MATCH (community:Community {uuid: $community_uuid}) 
         MATCH (node:Entity | Community {uuid: $entity_uuid}) 

graphiti_core/models/nodes/node_db_queries.py

@@ -4,12 +4,29 @@ EPISODIC_NODE_SAVE = """
         entity_edges: $entity_edges, created_at: $created_at, valid_at: $valid_at}
         RETURN n.uuid AS uuid"""
 
+EPISODIC_NODE_SAVE_BULK = """
+    UNWIND $episodes AS episode
+    MERGE (n:Episodic {uuid: episode.uuid})
+    SET n = {uuid: episode.uuid, name: episode.name, group_id: episode.group_id, source_description: episode.source_description, 
+        source: episode.source, content: episode.content, 
+    entity_edges: episode.entity_edges, created_at: episode.created_at, valid_at: episode.valid_at}
+    RETURN n.uuid AS uuid
+"""
+
 ENTITY_NODE_SAVE = """
         MERGE (n:Entity {uuid: $uuid})
         SET n = {uuid: $uuid, name: $name, group_id: $group_id, summary: $summary, created_at: $created_at}
         WITH n CALL db.create.setNodeVectorProperty(n, "name_embedding", $name_embedding)
         RETURN n.uuid AS uuid"""
 
+ENTITY_NODE_SAVE_BULK = """
+    UNWIND $nodes AS node
+    MERGE (n:Entity {uuid: node.uuid})
+    SET n = {uuid: node.uuid, name: node.name, group_id: node.group_id, summary: node.summary, created_at: node.created_at}
+    WITH n, node CALL db.create.setNodeVectorProperty(n, "name_embedding", node.name_embedding)
+    RETURN n.uuid AS uuid
+"""
+
 COMMUNITY_NODE_SAVE = """
         MERGE (n:Community {uuid: $uuid})
         SET n = {uuid: $uuid, name: $name, group_id: $group_id, summary: $summary, created_at: $created_at}

graphiti_core/search/search_utils.py

@@ -21,9 +21,15 @@ from time import time
 
 import numpy as np
 from neo4j import AsyncDriver, Query
+from typing_extensions import LiteralString
 
 from graphiti_core.edges import EntityEdge, get_entity_edge_from_record
-from graphiti_core.helpers import DEFAULT_DATABASE, lucene_sanitize, normalize_l2
+from graphiti_core.helpers import (
+    DEFAULT_DATABASE,
+    USE_PARALLEL_RUNTIME,
+    lucene_sanitize,
+    normalize_l2,
+)
 from graphiti_core.nodes import (
     CommunityNode,
     EntityNode,
@@ -38,7 +44,7 @@ RELEVANT_SCHEMA_LIMIT = 3
 DEFAULT_MIN_SCORE = 0.6
 DEFAULT_MMR_LAMBDA = 0.5
 MAX_SEARCH_DEPTH = 3
-MAX_QUERY_LENGTH = 128
+MAX_QUERY_LENGTH = 32
 
 
 def fulltext_query(query: str, group_ids: list[str] | None = None):
@@ -187,8 +193,11 @@ async def edge_similarity_search(
     min_score: float = DEFAULT_MIN_SCORE,
 ) -> list[EntityEdge]:
     # vector similarity search over embedded facts
-    query = Query("""
-                CYPHER runtime = parallel parallelRuntimeSupport=all
+    runtime_query: LiteralString = (
+        'CYPHER runtime = parallel parallelRuntimeSupport=all\n' if USE_PARALLEL_RUNTIME else ''
+    )
+
+    query: LiteralString = """
                 MATCH (n:Entity)-[r:RELATES_TO]->(m:Entity)
                 WHERE ($group_ids IS NULL OR r.group_id IN $group_ids)
                 AND ($source_uuid IS NULL OR n.uuid IN [$source_uuid, $target_uuid])
@@ -210,10 +219,10 @@ async def edge_similarity_search(
                     r.invalid_at AS invalid_at
                 ORDER BY score DESC
                 LIMIT $limit
-        """)
+        """
 
     records, _, _ = await driver.execute_query(
-        query,
+        runtime_query + query,
         search_vector=search_vector,
         source_uuid=source_node_uuid,
         target_uuid=target_node_uuid,
@@ -318,9 +327,13 @@ async def node_similarity_search(
     min_score: float = DEFAULT_MIN_SCORE,
 ) -> list[EntityNode]:
     # vector similarity search over entity names
+    runtime_query: LiteralString = (
+        'CYPHER runtime = parallel parallelRuntimeSupport=all\n' if USE_PARALLEL_RUNTIME else ''
+    )
+
     records, _, _ = await driver.execute_query(
-        """
-            CYPHER runtime = parallel parallelRuntimeSupport=all
+        runtime_query
+        + """
             MATCH (n:Entity)
             WHERE $group_ids IS NULL OR n.group_id IN $group_ids
             WITH n, vector.similarity.cosine(n.name_embedding, $search_vector) AS score
@@ -425,23 +438,27 @@ async def community_similarity_search(
     min_score=DEFAULT_MIN_SCORE,
 ) -> list[CommunityNode]:
     # vector similarity search over entity names
+    runtime_query: LiteralString = (
+        'CYPHER runtime = parallel parallelRuntimeSupport=all\n' if USE_PARALLEL_RUNTIME else ''
+    )
+
     records, _, _ = await driver.execute_query(
-        """
-            CYPHER runtime = parallel parallelRuntimeSupport=all
-            MATCH (comm:Community)
-            WHERE ($group_ids IS NULL OR comm.group_id IN $group_ids)
-            WITH comm, vector.similarity.cosine(comm.name_embedding, $search_vector) AS score
-            WHERE score > $min_score
-            RETURN
-                comm.uuid As uuid,
-                comm.group_id AS group_id,
-                comm.name AS name, 
-                comm.name_embedding AS name_embedding,
-                comm.created_at AS created_at, 
-                comm.summary AS summary
-            ORDER BY score DESC
-            LIMIT $limit
-            """,
+        runtime_query
+        + """
+           MATCH (comm:Community)
+           WHERE ($group_ids IS NULL OR comm.group_id IN $group_ids)
+           WITH comm, vector.similarity.cosine(comm.name_embedding, $search_vector) AS score
+           WHERE score > $min_score
+           RETURN
+               comm.uuid As uuid,
+               comm.group_id AS group_id,
+               comm.name AS name, 
+               comm.name_embedding AS name_embedding,
+               comm.created_at AS created_at, 
+               comm.summary AS summary
+           ORDER BY score DESC
+           LIMIT $limit
+        """,
         search_vector=search_vector,
         group_ids=group_ids,
         limit=limit,

graphiti_core/utils/bulk_utils.py

@@ -21,12 +21,20 @@ from collections import defaultdict
 from datetime import datetime
 from math import ceil
 
-from neo4j import AsyncDriver
+from neo4j import AsyncDriver, AsyncManagedTransaction
 from numpy import dot, sqrt
 from pydantic import BaseModel
 
 from graphiti_core.edges import Edge, EntityEdge, EpisodicEdge
 from graphiti_core.llm_client import LLMClient
+from graphiti_core.models.edges.edge_db_queries import (
+    ENTITY_EDGE_SAVE_BULK,
+    EPISODIC_EDGE_SAVE_BULK,
+)
+from graphiti_core.models.nodes.node_db_queries import (
+    ENTITY_NODE_SAVE_BULK,
+    EPISODIC_NODE_SAVE_BULK,
+)
 from graphiti_core.nodes import EntityNode, EpisodeType, EpisodicNode
 from graphiti_core.search.search_utils import get_relevant_edges, get_relevant_nodes
 from graphiti_core.utils import retrieve_episodes
@@ -75,6 +83,35 @@ async def retrieve_previous_episodes_bulk(
     return episode_tuples
 
 
+async def add_nodes_and_edges_bulk(
+    driver: AsyncDriver,
+    episodic_nodes: list[EpisodicNode],
+    episodic_edges: list[EpisodicEdge],
+    entity_nodes: list[EntityNode],
+    entity_edges: list[EntityEdge],
+):
+    async with driver.session() as session:
+        await session.execute_write(
+            add_nodes_and_edges_bulk_tx, episodic_nodes, episodic_edges, entity_nodes, entity_edges
+        )
+
+
+async def add_nodes_and_edges_bulk_tx(
+    tx: AsyncManagedTransaction,
+    episodic_nodes: list[EpisodicNode],
+    episodic_edges: list[EpisodicEdge],
+    entity_nodes: list[EntityNode],
+    entity_edges: list[EntityEdge],
+):
+    episodes = [dict(episode) for episode in episodic_nodes]
+    for episode in episodes:
+        episode['source'] = str(episode['source'].value)
+    await tx.run(EPISODIC_NODE_SAVE_BULK, episodes=episodes)
+    await tx.run(ENTITY_NODE_SAVE_BULK, nodes=[dict(entity) for entity in entity_nodes])
+    await tx.run(EPISODIC_EDGE_SAVE_BULK, episodic_edges=[dict(edge) for edge in episodic_edges])
+    await tx.run(ENTITY_EDGE_SAVE_BULK, entity_edges=[dict(edge) for edge in entity_edges])
+
+
 async def extract_nodes_and_edges_bulk(
     llm_client: LLMClient, episode_tuples: list[tuple[EpisodicNode, list[EpisodicNode]]]
 ) -> tuple[list[EntityNode], list[EntityEdge], list[EpisodicEdge]]:

pyproject.toml

@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "graphiti-core"
-version = "0.3.19"
+version = "0.3.20"
 description = "A temporal graph building library"
 authors = [
     "Paul Paliychuk <paul@getzep.com>",