diff --git a/.github/dependabot.yml b/.github/dependabot.yml index 9d866e39..b674a51a 100644 --- a/.github/dependabot.yml +++ b/.github/dependabot.yml @@ -9,3 +9,11 @@ updates: directory: "/" # Location of package manifests schedule: interval: "weekly" + - package-ecosystem: "pip" + directory: "/server" # Location of server package manifests + schedule: + interval: "weekly" + - package-ecosystem: "pip" + directory: "/mcp_server" # Location of server package manifests + schedule: + interval: "weekly" \ No newline at end of file diff --git a/.github/workflows/release-graphiti-core.yml b/.github/workflows/release-graphiti-core.yml index 5c951c8b..e52209d3 100644 --- a/.github/workflows/release-graphiti-core.yml +++ b/.github/workflows/release-graphiti-core.yml @@ -4,9 +4,6 @@ on: push: tags: ["v*.*.*"] -env: - POETRY_VERSION: "2.1.2" - jobs: release: runs-on: ubuntu-latest @@ -18,21 +15,23 @@ jobs: url: https://pypi.org/p/zep-cloud steps: - uses: actions/checkout@v4 - - name: Install poetry - run: pipx install poetry==$POETRY_VERSION - name: Set up Python 3.10 uses: actions/setup-python@v5 with: python-version: "3.10" - cache: "poetry" + - name: Install uv + uses: astral-sh/setup-uv@v3 + with: + version: "latest" - name: Compare pyproject version with tag run: | TAG_VERSION=${GITHUB_REF#refs/tags/} - if [ "$TAG_VERSION" != "v$(poetry version --short)" ]; then - echo "Tag version $TAG_VERSION does not match the project version $(poetry version --short)" + PROJECT_VERSION=$(uv run python -c "import tomllib; print('v' + tomllib.load(open('pyproject.toml', 'rb'))['project']['version'])") + if [ "$TAG_VERSION" != "$PROJECT_VERSION" ]; then + echo "Tag version $TAG_VERSION does not match the project version $PROJECT_VERSION" exit 1 fi - name: Build project for distribution - run: poetry build + run: uv build - name: Publish package distributions to PyPI uses: pypa/gh-action-pypi-publish@release/v1 diff --git a/.github/workflows/typecheck.yml b/.github/workflows/typecheck.yml index 7260eaec..f4ae01cd 100644 --- a/.github/workflows/typecheck.yml +++ b/.github/workflows/typecheck.yml @@ -17,20 +17,17 @@ jobs: uses: actions/setup-python@v5 with: python-version: "3.10" - - name: Install Poetry - uses: snok/install-poetry@v1 + - name: Install uv + uses: astral-sh/setup-uv@v3 with: - version: 2.1.2 - virtualenvs-create: true - virtualenvs-in-project: true - installer-parallel: true + version: "latest" - name: Install dependencies - run: poetry install --no-interaction --with dev + run: uv sync --extra dev - name: Run MyPy for graphiti-core shell: bash run: | set -o pipefail - poetry run mypy ./graphiti_core --show-column-numbers --show-error-codes | sed -E ' + uv run mypy ./graphiti_core --show-column-numbers --show-error-codes | sed -E ' s/^(.*):([0-9]+):([0-9]+): (error|warning): (.+) \[(.+)\]/::error file=\1,line=\2,endLine=\2,col=\3,title=\6::\5/; s/^(.*):([0-9]+):([0-9]+): note: (.+)/::notice file=\1,line=\2,endLine=\2,col=\3,title=Note::\4/; ' @@ -38,13 +35,13 @@ jobs: shell: bash run: | cd server - poetry install --no-interaction --with dev + uv sync --extra dev - name: Run MyPy for graph-service shell: bash run: | cd server set -o pipefail - poetry run mypy . --show-column-numbers --show-error-codes | sed -E ' + uv run mypy . --show-column-numbers --show-error-codes | sed -E ' s/^(.*):([0-9]+):([0-9]+): (error|warning): (.+) \[(.+)\]/::error file=\1,line=\2,endLine=\2,col=\3,title=\6::\5/; s/^(.*):([0-9]+):([0-9]+): note: (.+)/::notice file=\1,line=\2,endLine=\2,col=\3,title=Note::\4/; ' diff --git a/.github/workflows/unit_tests.yml b/.github/workflows/unit_tests.yml index 5facdaad..a6782291 100644 --- a/.github/workflows/unit_tests.yml +++ b/.github/workflows/unit_tests.yml @@ -17,22 +17,14 @@ jobs: uses: actions/setup-python@v5 with: python-version: "3.10" - - name: Load cached Poetry installation - uses: actions/cache@v4 + - name: Install uv + uses: astral-sh/setup-uv@v3 with: - path: ~/.local - key: poetry-${{ runner.os }}-${{ hashFiles('**/poetry.lock') }} - - name: Install Poetry - uses: snok/install-poetry@v1 - with: - version: 2.1.2 - virtualenvs-create: true - virtualenvs-in-project: true - installer-parallel: true + version: "latest" - name: Install dependencies - run: poetry install --no-interaction --no-root + run: uv sync --extra dev - name: Run non-integration tests env: PYTHONPATH: ${{ github.workspace }} run: | - poetry run pytest -m "not integration" + uv run pytest -m "not integration" diff --git a/.gitignore b/.gitignore index 64247bd4..b5ae3f92 100644 --- a/.gitignore +++ b/.gitignore @@ -95,12 +95,11 @@ ipython_config.py # install all needed dependencies. #Pipfile.lock -# poetry -# Similar to Pipfile.lock, it is generally recommended to include poetry.lock in version control. -# This is especially recommended for binary packages to ensure reproducibility, and is more -# commonly ignored for libraries. -# https://python-poetry.org/docs/basic-usage/#commit-your-poetrylock-file-to-version-control -#poetry.lock +# uv +# It is generally recommended to include uv.lock in version control. +# This ensures reproducibility across different environments. +# https://docs.astral.sh/uv/concepts/projects/#lockfile +# uv.lock # pdm # Similar to Pipfile.lock, it is generally recommended to include pdm.lock in version control. diff --git a/CONTRIBUTING.md b/CONTRIBUTING.md index b5b7156e..a70ce240 100644 --- a/CONTRIBUTING.md +++ b/CONTRIBUTING.md @@ -20,11 +20,11 @@ For **feature requests**, tell us the story of what you're trying to accomplish. For **bug reports**, we need enough context to reproduce the problem. Use the [GitHub issue tracker](https://github.com/getzep/graphiti/issues) and include: -- A clear title that summarizes the specific problem -- What you were trying to do when you encountered the bug -- What you expected to happen -- What actually happened -- A code sample or test case that demonstrates the issue +- A clear title that summarizes the specific problem +- What you were trying to do when you encountered the bug +- What you expected to happen +- What actually happened +- A code sample or test case that demonstrates the issue ### Share Your Use Cases @@ -46,78 +46,78 @@ Once you've found an issue tagged with "good first issue" or "help wanted," or p 1. Fork the repository on GitHub. 2. Clone your fork locally: - ``` - git clone https://github.com/getzep/graphiti - cd graphiti - ``` + ``` + git clone https://github.com/getzep/graphiti + cd graphiti + ``` 3. Set up your development environment: - - Ensure you have Python 3.10+ installed. - - Install Poetry: https://python-poetry.org/docs/#installation - - Install project dependencies: - ``` - make install - ``` - - To run integration tests, set the appropriate environment variables + - Ensure you have Python 3.10+ installed. + - Install uv: https://docs.astral.sh/uv/getting-started/installation/ + - Install project dependencies: + ``` + make install + ``` + - To run integration tests, set the appropriate environment variables - ``` - export TEST_OPENAI_API_KEY=... - export TEST_OPENAI_MODEL=... - export TEST_ANTHROPIC_API_KEY=... - - # For Neo4j - export TEST_URI=neo4j://... - export TEST_USER=... - export TEST_PASSWORD=... - ``` + ``` + export TEST_OPENAI_API_KEY=... + export TEST_OPENAI_MODEL=... + export TEST_ANTHROPIC_API_KEY=... + + # For Neo4j + export TEST_URI=neo4j://... + export TEST_USER=... + export TEST_PASSWORD=... + ``` ## Making Changes 1. Create a new branch for your changes: - ``` - git checkout -b your-branch-name - ``` + ``` + git checkout -b your-branch-name + ``` 2. Make your changes in the codebase. 3. Write or update tests as necessary. 4. Run the tests to ensure they pass: - ``` - make test - ``` + ``` + make test + ``` 5. Format your code: - ``` - make format - ``` + ``` + make format + ``` 6. Run linting checks: - ``` - make lint - ``` + ``` + make lint + ``` ## Submitting Changes 1. Commit your changes: - ``` - git commit -m "Your detailed commit message" - ``` + ``` + git commit -m "Your detailed commit message" + ``` 2. Push to your fork: - ``` - git push origin your-branch-name - ``` + ``` + git push origin your-branch-name + ``` 3. Submit a pull request through the GitHub website to https://github.com/getzep/graphiti. ## Pull Request Guidelines -- Provide a clear title and description of your changes. -- Include any relevant issue numbers in the PR description. -- Ensure all tests pass and there are no linting errors. -- Update documentation if you're changing functionality. +- Provide a clear title and description of your changes. +- Include any relevant issue numbers in the PR description. +- Ensure all tests pass and there are no linting errors. +- Update documentation if you're changing functionality. ## Code Style and Quality We use several tools to maintain code quality: -- Ruff for linting and formatting -- Mypy for static type checking -- Pytest for testing +- Ruff for linting and formatting +- Mypy for static type checking +- Pytest for testing Before submitting a pull request, please run: diff --git a/Dockerfile b/Dockerfile index 9e47413e..a11e5191 100644 --- a/Dockerfile +++ b/Dockerfile @@ -1,43 +1,87 @@ -# Build stage +# syntax=docker/dockerfile:1.9 FROM python:3.12-slim as builder WORKDIR /app -# Install system dependencies +# Install system dependencies for building RUN apt-get update && apt-get install -y --no-install-recommends \ gcc \ + curl \ + ca-certificates \ && rm -rf /var/lib/apt/lists/* -# Install Poetry -RUN pip install --no-cache-dir poetry +# Install uv using the installer script +ADD https://astral.sh/uv/install.sh /uv-installer.sh +RUN sh /uv-installer.sh && rm /uv-installer.sh +ENV PATH="/root/.local/bin:$PATH" -# Copy only the files needed for installation -COPY ./pyproject.toml ./poetry.lock* ./README.md /app/ -COPY ./graphiti_core /app/graphiti_core -COPY ./server/pyproject.toml ./server/poetry.lock* /app/server/ +# Configure uv for optimal Docker usage +ENV UV_COMPILE_BYTECODE=1 \ + UV_LINK_MODE=copy \ + UV_PYTHON_DOWNLOADS=never -RUN poetry config virtualenvs.create false +# Copy and build main graphiti-core project +COPY ./pyproject.toml ./README.md ./ +COPY ./graphiti_core ./graphiti_core -# Install the local package -RUN poetry build && pip install dist/*.whl +# Build graphiti-core wheel +RUN --mount=type=cache,target=/root/.cache/uv \ + uv build -# Install server dependencies -WORKDIR /app/server -RUN poetry install --no-interaction --no-ansi --only main --no-root +# Install the built wheel to make it available for server +RUN --mount=type=cache,target=/root/.cache/uv \ + pip install dist/*.whl +# Runtime stage - build the server here FROM python:3.12-slim -# Copy only the necessary files from the builder stage -COPY --from=builder /usr/local/lib/python3.12/site-packages /usr/local/lib/python3.12/site-packages -COPY --from=builder /usr/local/bin /usr/local/bin +# Install uv using the installer script +RUN apt-get update && apt-get install -y --no-install-recommends \ + curl \ + ca-certificates \ + && rm -rf /var/lib/apt/lists/* -# Create the app directory and copy server files +ADD https://astral.sh/uv/install.sh /uv-installer.sh +RUN sh /uv-installer.sh && rm /uv-installer.sh +ENV PATH="/root/.local/bin:$PATH" + +# Configure uv for runtime +ENV UV_COMPILE_BYTECODE=1 \ + UV_LINK_MODE=copy \ + UV_PYTHON_DOWNLOADS=never + +# Create non-root user +RUN groupadd -r app && useradd -r -d /app -g app app + +# Copy graphiti-core wheel from builder +COPY --from=builder /app/dist/*.whl /tmp/ + +# Install graphiti-core wheel first +RUN --mount=type=cache,target=/root/.cache/uv \ + uv pip install --system /tmp/*.whl + +# Set up the server application WORKDIR /app -COPY ./server /app +COPY ./server/pyproject.toml ./server/README.md ./server/uv.lock ./ +COPY ./server/graph_service ./graph_service + +# Install server dependencies and application +RUN --mount=type=cache,target=/root/.cache/uv \ + uv sync --frozen --no-dev + +# Change ownership to app user +RUN chown -R app:app /app # Set environment variables -ENV PYTHONUNBUFFERED=1 -ENV PORT=8000 -# Command to run the application +ENV PYTHONUNBUFFERED=1 \ + PATH="/app/.venv/bin:$PATH" -CMD uvicorn graph_service.main:app --host 0.0.0.0 --port $PORT \ No newline at end of file +# Switch to non-root user +USER app + +# Set port +ENV PORT=8000 +EXPOSE $PORT + +# Use uv run for execution +CMD ["uv", "run", "uvicorn", "graph_service.main:app", "--host", "0.0.0.0", "--port", "8000"] \ No newline at end of file diff --git a/Makefile b/Makefile index 7ed115af..7a292c3b 100644 --- a/Makefile +++ b/Makefile @@ -2,17 +2,17 @@ # Define variables PYTHON = python3 -POETRY = poetry -PYTEST = $(POETRY) run pytest -RUFF = $(POETRY) run ruff -MYPY = $(POETRY) run mypy +UV = uv +PYTEST = $(UV) run pytest +RUFF = $(UV) run ruff +MYPY = $(UV) run mypy # Default target all: format lint test # Install dependencies install: - $(POETRY) install --with dev + $(UV) sync --extra dev # Format code format: diff --git a/README.md b/README.md index c03d2de8..1a170b6b 100644 --- a/README.md +++ b/README.md @@ -128,7 +128,7 @@ pip install graphiti-core or ```bash -poetry add graphiti-core +uv add graphiti-core ``` You can also install optional LLM providers as extras: @@ -261,11 +261,11 @@ Graphiti supports Google's Gemini models for both LLM inference and embeddings. Install Graphiti: ```bash -poetry add "graphiti-core[google-genai]" +uv add "graphiti-core[google-genai]" # or -uv add "graphiti-core[google-genai]" +pip install "graphiti-core[google-genai]" ``` ```python @@ -302,10 +302,9 @@ graphiti = Graphiti( Graphiti supports Ollama for running local LLMs and embedding models via Ollama's OpenAI-compatible API. This is ideal for privacy-focused applications or when you want to avoid API costs. - Install the models: -ollama pull deepseek-r1:7b # LLM -ollama pull nomic-embed-text # embeddings +ollama pull deepseek-r1:7b # LLM +ollama pull nomic-embed-text # embeddings ```python from graphiti_core import Graphiti @@ -346,7 +345,6 @@ graphiti = Graphiti( Ensure Ollama is running (`ollama serve`) and that you have pulled the models you want to use. - ## Documentation - [Guides and API documentation](https://help.getzep.com/graphiti). diff --git a/docker-compose.test.yml b/docker-compose.test.yml index 34f38e2f..8ed07501 100644 --- a/docker-compose.test.yml +++ b/docker-compose.test.yml @@ -1,5 +1,3 @@ -version: '3.8' - services: graph: image: graphiti-service:${GITHUB_SHA} @@ -38,4 +36,4 @@ services: retries: 20 start_period: 3s environment: - - NEO4J_AUTH=${NEO4J_USER}/${NEO4J_PASSWORD} \ No newline at end of file + - NEO4J_AUTH=${NEO4J_USER}/${NEO4J_PASSWORD} diff --git a/docker-compose.yml b/docker-compose.yml index 5717e16d..0400692c 100644 --- a/docker-compose.yml +++ b/docker-compose.yml @@ -1,5 +1,3 @@ -version: "3.8" - services: graph: build: @@ -22,21 +20,25 @@ services: condition: service_healthy environment: - OPENAI_API_KEY=${OPENAI_API_KEY} - - NEO4J_URI=bolt://neo4j:${NEO4J_PORT} + - NEO4J_URI=bolt://neo4j:${NEO4J_PORT:-7687} - NEO4J_USER=${NEO4J_USER} - NEO4J_PASSWORD=${NEO4J_PASSWORD} - PORT=8000 neo4j: image: neo4j:5.26.2 healthcheck: - test: wget "http://localhost:${NEO4J_PORT}" || exit 1 + test: + [ + "CMD-SHELL", + "wget -qO- http://localhost:${NEO4J_PORT:-7474} || exit 1", + ] interval: 1s timeout: 10s - retries: 20 + retries: 10 start_period: 3s ports: - "7474:7474" # HTTP - - "${NEO4J_PORT}:${NEO4J_PORT}" # Bolt + - "${NEO4J_PORT:-7687}:${NEO4J_PORT:-7687}" # Bolt volumes: - neo4j_data:/data environment: diff --git a/mcp_server/Dockerfile b/mcp_server/Dockerfile index 83c51949..0aa59763 100644 --- a/mcp_server/Dockerfile +++ b/mcp_server/Dockerfile @@ -1,28 +1,49 @@ -FROM python:3.11-slim +# syntax=docker/dockerfile:1.9 +FROM python:3.12-slim WORKDIR /app -# Install uv for package management -RUN apt-get update && apt-get install -y curl && \ - curl -LsSf https://astral.sh/uv/install.sh | sh && \ - apt-get clean && rm -rf /var/lib/apt/lists/* +# Install system dependencies +RUN apt-get update && apt-get install -y --no-install-recommends \ + curl \ + ca-certificates \ + && rm -rf /var/lib/apt/lists/* + +# Install uv using the installer script +ADD https://astral.sh/uv/install.sh /uv-installer.sh +RUN sh /uv-installer.sh && rm /uv-installer.sh # Add uv to PATH ENV PATH="/root/.local/bin:${PATH}" -ENV MCP_SERVER_HOST="0.0.0.0" +# Configure uv for optimal Docker usage +ENV UV_COMPILE_BYTECODE=1 \ + UV_LINK_MODE=copy \ + UV_PYTHON_DOWNLOADS=never \ + MCP_SERVER_HOST="0.0.0.0" \ + PYTHONUNBUFFERED=1 -# Copy pyproject.toml and install dependencies -COPY pyproject.toml . -RUN uv sync +# Create non-root user +RUN groupadd -r app && useradd -r -d /app -g app app + +# Copy project files for dependency installation (better caching) +COPY pyproject.toml uv.lock ./ + +# Install dependencies first (better layer caching) +RUN --mount=type=cache,target=/root/.cache/uv \ + uv sync --frozen --no-dev # Copy application code -COPY graphiti_mcp_server.py . +COPY graphiti_mcp_server.py ./ +# Change ownership to app user +RUN chown -R app:app /app + +# Switch to non-root user +USER app + +# Expose port EXPOSE 8000 -# Set environment variables -ENV PYTHONUNBUFFERED=1 - 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