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feat: Add KuzuDB support to MCP server and make it default

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- Add KuzuProviderConfig to schema for KuzuDB configuration
- Update DatabaseDriverFactory to support KuzuDB initialization
- Modify GraphitiService to handle KuzuDB driver instantiation
- Update CLI argument parser to include 'kuzu' option
- Make KuzuDB the default database provider (in-memory by default)
- Add docker-compose-kuzu.yml for standalone KuzuDB deployment
- Fix FalkorDB factory to parse URI into host/port parameters
- Fix EntityNode type access (use labels[0] instead of type)
- Add kuzu dependency to MCP server pyproject.toml

🤖 Generated with [Claude Code](https://claude.ai/code)

Co-Authored-By: Claude <noreply@anthropic.com>
This commit is contained in:
Daniel Chalef 2025-08-30 08:36:01 -07:00
parent f41a1e7ce3
commit 2e345698e4
7 changed files with 237 additions and 23 deletions
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6
mcp_server/config/config.yaml
View file

@ -68,7 +68,7 @@ embedder:
model: "voyage-3"
database:
provider: "neo4j" # Options: neo4j, falkordb
provider: "kuzu" # Options: neo4j, falkordb, kuzu
providers:
neo4j:
@ -82,6 +82,10 @@ database:
uri: ${FALKORDB_URI:redis://localhost:6379}
password: ${FALKORDB_PASSWORD:}
database: ${FALKORDB_DATABASE:default_db}
kuzu:
db: ${KUZU_DB::memory:}
max_concurrent_queries: ${KUZU_MAX_CONCURRENT_QUERIES:1}
graphiti:
group_id: ${GRAPHITI_GROUP_ID:main}

42
mcp_server/docker/docker-compose-kuzu.yml Normal file
View file

@ -0,0 +1,42 @@
services:
graphiti-mcp:
image: zepai/knowledge-graph-mcp:latest
build:
context: .
dockerfile: Dockerfile
env_file:
- path: .env
required: false # Makes the file optional. Default value is 'true'
environment:
# Database configuration for KuzuDB
- KUZU_DB=${KUZU_DB:-:memory:}
- KUZU_MAX_CONCURRENT_QUERIES=${KUZU_MAX_CONCURRENT_QUERIES:-1}
# LLM provider configurations
- OPENAI_API_KEY=${OPENAI_API_KEY}
- ANTHROPIC_API_KEY=${ANTHROPIC_API_KEY}
- GOOGLE_API_KEY=${GOOGLE_API_KEY}
- GROQ_API_KEY=${GROQ_API_KEY}
- AZURE_OPENAI_API_KEY=${AZURE_OPENAI_API_KEY}
- AZURE_OPENAI_ENDPOINT=${AZURE_OPENAI_ENDPOINT}
- AZURE_OPENAI_DEPLOYMENT=${AZURE_OPENAI_DEPLOYMENT}
# Embedder provider configurations
- VOYAGE_API_KEY=${VOYAGE_API_KEY}
- AZURE_OPENAI_EMBEDDINGS_ENDPOINT=${AZURE_OPENAI_EMBEDDINGS_ENDPOINT}
- AZURE_OPENAI_EMBEDDINGS_DEPLOYMENT=${AZURE_OPENAI_EMBEDDINGS_DEPLOYMENT}
# Application configuration
- GRAPHITI_GROUP_ID=${GRAPHITI_GROUP_ID:-main}
- SEMAPHORE_LIMIT=${SEMAPHORE_LIMIT:-10}
- CONFIG_PATH=/app/config/config.yaml
- PATH=/root/.local/bin:${PATH}
volumes:
- ./config.yaml:/app/config/config.yaml:ro
# Optional: If you want to persist KuzuDB data, uncomment the following line
# and change KUZU_DB to /data/kuzu.db
# - kuzu_data:/data
ports:
- "8000:8000" # Expose the MCP server via HTTP for SSE transport
command: ["uv", "run", "graphiti_mcp_server.py", "--transport", "sse", "--config", "/app/config/config.yaml"]
# Optional: Volume for persistent KuzuDB storage
# volumes:
# kuzu_data:

4
mcp_server/pyproject.toml
View file

@ -12,6 +12,7 @@ dependencies = [
"pydantic-settings>=2.0.0",
"pyyaml>=6.0",
"pytest>=8.4.1",
"kuzu>=0.11.2",
]
[project.optional-dependencies]
@ -63,3 +64,6 @@ ignore = ["E501"]
quote-style = "single"
indent-style = "space"
docstring-code-format = true
[tool.uv.sources]
graphiti-core = { path = "../", editable = true }

10
mcp_server/src/config/schema.py
View file

@ -171,17 +171,25 @@ class FalkorDBProviderConfig(BaseModel):
database: str = 'default_db'
class KuzuProviderConfig(BaseModel):
"""KuzuDB provider configuration."""
db: str = ':memory:'
max_concurrent_queries: int = 1
class DatabaseProvidersConfig(BaseModel):
"""Database providers configuration."""
neo4j: Neo4jProviderConfig | None = None
falkordb: FalkorDBProviderConfig | None = None
kuzu: KuzuProviderConfig | None = None
class DatabaseConfig(BaseModel):
"""Database configuration."""
provider: str = Field(default='neo4j', description='Database provider')
provider: str = Field(default='kuzu', description='Database provider')
providers: DatabaseProvidersConfig = Field(default_factory=DatabaseProvidersConfig)

61
mcp_server/src/graphiti_mcp_server.py
View file

@ -154,18 +154,53 @@ class GraphitiService:
# Store entity types for later use
self.entity_types = custom_types
# Initialize Graphiti client with database connection params
self.client = Graphiti(
uri=db_config['uri'],
user=db_config['user'],
password=db_config['password'],
llm_client=llm_client,
embedder=embedder_client,
max_coroutines=self.semaphore_limit,
)
# Initialize Graphiti client with appropriate driver
if self.config.database.provider.lower() == 'kuzu':
# For KuzuDB, create a KuzuDriver instance directly
from graphiti_core.driver.kuzu_driver import KuzuDriver
# Test connection
await self.client.driver.client.verify_connectivity() # type: ignore
kuzu_driver = KuzuDriver(
db=db_config['db'],
max_concurrent_queries=db_config['max_concurrent_queries'],
)
self.client = Graphiti(
graph_driver=kuzu_driver,
llm_client=llm_client,
embedder=embedder_client,
max_coroutines=self.semaphore_limit,
)
elif self.config.database.provider.lower() == 'falkordb':
# For FalkorDB, create a FalkorDriver instance directly
from graphiti_core.driver.falkordb_driver import FalkorDriver
falkor_driver = FalkorDriver(
host=db_config['host'],
port=db_config['port'],
password=db_config['password'],
database=db_config['database'],
)
self.client = Graphiti(
graph_driver=falkor_driver,
llm_client=llm_client,
embedder=embedder_client,
max_coroutines=self.semaphore_limit,
)
else:
# For Neo4j (default), use the original approach
self.client = Graphiti(
uri=db_config['uri'],
user=db_config['user'],
password=db_config['password'],
llm_client=llm_client,
embedder=embedder_client,
max_coroutines=self.semaphore_limit,
)
# Test connection (Neo4j and FalkorDB have verify_connectivity, KuzuDB doesn't need it)
if self.config.database.provider.lower() != 'kuzu':
await self.client.driver.client.verify_connectivity() # type: ignore
# Build indices
await self.client.build_indices_and_constraints()
@ -345,7 +380,7 @@ async def search_nodes(
NodeResult(
uuid=node.uuid,
name=node.name,
type=node.type or 'Unknown',
type=node.labels[0] if node.labels else 'Unknown',
created_at=node.created_at.isoformat() if node.created_at else None,
summary=node.summary,
)
@ -667,7 +702,7 @@ async def initialize_server() -> ServerConfig:
)
parser.add_argument(
'--database-provider',
choices=['neo4j', 'falkordb'],
choices=['neo4j', 'falkordb', 'kuzu'],
help='Database provider to use',
)

46
mcp_server/src/services/factories.py
View file

@ -15,6 +15,14 @@ try:
HAS_FALKOR = True
except ImportError:
HAS_FALKOR = False
# Try to import KuzuDriver if available
try:
from graphiti_core.driver.kuzu_driver import KuzuDriver # noqa: F401
HAS_KUZU = True
except ImportError:
HAS_KUZU = False
from graphiti_core.embedder import EmbedderClient, OpenAIEmbedder
from graphiti_core.llm_client import LLMClient, OpenAIClient
from graphiti_core.llm_client.config import LLMConfig as GraphitiLLMConfig
@ -327,16 +335,52 @@ class DatabaseDriverFactory:
# Check for environment variable overrides (for CI/CD compatibility)
import os
from urllib.parse import urlparse
uri = os.environ.get('FALKORDB_URI', falkor_config.uri)
password = os.environ.get('FALKORDB_PASSWORD', falkor_config.password)
# Parse the URI to extract host and port
parsed = urlparse(uri)
host = parsed.hostname or 'localhost'
port = parsed.port or 6379
return {
'driver': 'falkordb',
'uri': uri,
'host': host,
'port': port,
'password': password,
'database': falkor_config.database,
}
case 'kuzu':
if not HAS_KUZU:
raise ValueError('KuzuDB driver not available in current graphiti-core version')
# Use KuzuDB config if provided, otherwise use defaults
if config.providers.kuzu:
kuzu_config = config.providers.kuzu
else:
# Create default KuzuDB configuration
from config.schema import KuzuProviderConfig
kuzu_config = KuzuProviderConfig()
# Check for environment variable overrides (for CI/CD compatibility)
import os
db = os.environ.get('KUZU_DB', kuzu_config.db)
max_concurrent_queries = int(
os.environ.get(
'KUZU_MAX_CONCURRENT_QUERIES', kuzu_config.max_concurrent_queries
)
)
return {
'driver': 'kuzu',
'db': db,
'max_concurrent_queries': max_concurrent_queries,
}
case _:
raise ValueError(f'Unsupported Database provider: {provider}')

91
mcp_server/uv.lock generated
View file

@ -613,8 +613,8 @@ wheels = [
[[package]]
name = "graphiti-core"
version = "0.18.9"
source = { registry = "https://pypi.org/simple" }
version = "0.19.0rc3"
source = { editable = "../" }
dependencies = [
{ name = "diskcache" },
{ name = "neo4j" },
@ -623,11 +623,52 @@ dependencies = [
{ name = "posthog" },
{ name = "pydantic" },
{ name = "python-dotenv" },
{ name = "pyyaml" },
{ name = "tenacity" },
]
sdist = { url = "https://files.pythonhosted.org/packages/2c/c5/b4480b44d40cc6031cc74fb703a36f1d81e03672f330c0e81ebfa7bda6ad/graphiti_core-0.18.9.tar.gz", hash = "sha256:00bce4693fe78f9484d46f54df34a086b35b6dda9bd07a8b09126e9e57c06f2c", size = 6467404 }
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[package.metadata]
requires-dist = [
{ name = "anthropic", marker = "extra == 'anthropic'", specifier = ">=0.49.0" },
{ name = "anthropic", marker = "extra == 'dev'", specifier = ">=0.49.0" },
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[[package]]
name = "langchain-core"
version = "0.3.74"
@ -992,6 +1067,7 @@ source = { virtual = "." }
dependencies = [
{ name = "azure-identity" },
{ name = "graphiti-core" },
{ name = "kuzu" },
{ name = "mcp" },
{ name = "openai" },
{ name = "pydantic-settings" },
@ -1024,8 +1100,9 @@ requires-dist = [
{ name = "anthropic", marker = "extra == 'providers'", specifier = ">=0.49.0" },
{ name = "azure-identity", specifier = ">=1.21.0" },
{ name = "google-genai", marker = "extra == 'providers'", specifier = ">=1.8.0" },
{ name = "graphiti-core", specifier = ">=0.16.0" },
{ name = "graphiti-core", editable = "../" },
{ name = "groq", marker = "extra == 'providers'", specifier = ">=0.2.0" },
{ name = "kuzu", specifier = ">=0.11.2" },
{ name = "mcp", specifier = ">=1.9.4" },
{ name = "openai", specifier = ">=1.91.0" },
{ name = "pydantic-settings", specifier = ">=2.0.0" },
@ -1037,7 +1114,7 @@ requires-dist = [
[package.metadata.requires-dev]
dev = [
{ name = "graphiti-core", specifier = ">=0.16.0" },
{ name = "graphiti-core", editable = "../" },
{ name = "httpx", specifier = ">=0.28.1" },
{ name = "mcp", specifier = ">=1.9.4" },
{ name = "pyright", specifier = ">=1.1.404" },