diff --git a/README.md b/README.md index 058016c1b..b9aa9994a 100644 --- a/README.md +++ b/README.md @@ -176,7 +176,7 @@ You can also cognify your files and query using cognee UI. Cognee UI 2 -Try cognee UI by runnning ``` cognee -ui ``` command on your terminal. +Try cognee UI by runnning ``` cognee-cli -ui ``` command on your terminal. ## Understand our architecture diff --git a/alembic/versions/211ab850ef3d_add_sync_operations_table.py b/alembic/versions/211ab850ef3d_add_sync_operations_table.py index f22c7c6e2..370aab1a4 100644 --- a/alembic/versions/211ab850ef3d_add_sync_operations_table.py +++ b/alembic/versions/211ab850ef3d_add_sync_operations_table.py @@ -14,7 +14,7 @@ import sqlalchemy as sa # revision identifiers, used by Alembic. revision: str = "211ab850ef3d" -down_revision: Union[str, None] = "9e7a3cb85175" +down_revision: Union[str, None] = "45957f0a9849" branch_labels: Union[str, Sequence[str], None] = None depends_on: Union[str, Sequence[str], None] = None diff --git a/cognee-frontend/src/app/dashboard/AddDataToCognee.tsx b/cognee-frontend/src/app/dashboard/AddDataToCognee.tsx index 4f9a3179e..60e2a4204 100644 --- a/cognee-frontend/src/app/dashboard/AddDataToCognee.tsx +++ b/cognee-frontend/src/app/dashboard/AddDataToCognee.tsx @@ -1,6 +1,8 @@ import { FormEvent, useCallback, useState } from "react"; -import { CloseIcon, PlusIcon } from "@/ui/Icons"; + +import { LoadingIndicator } from "@/ui/App"; import { useModal } from "@/ui/elements/Modal"; +import { CloseIcon, PlusIcon } from "@/ui/Icons"; import { CTAButton, GhostButton, IconButton, Modal, NeutralButton, Select } from "@/ui/elements"; import addData from "@/modules/ingestion/addData"; @@ -44,14 +46,19 @@ export default function AddDataToCognee({ datasets, refreshDatasets, useCloud = ) .then(({ dataset_id, dataset_name }) => { refreshDatasets(); - setFilesForUpload(null); - return cognifyDataset({ - id: dataset_id, - name: dataset_name, - data: [], // not important, just to mimick Dataset - status: "", // not important, just to mimick Dataset - }, useCloud); + return cognifyDataset( + { + id: dataset_id, + name: dataset_name, + data: [], // not important, just to mimick Dataset + status: "", // not important, just to mimick Dataset + }, + useCloud, + ) + .then(() => { + setFilesForUpload(null); + }); }); }, [filesForUpload, refreshDatasets, useCloud]); @@ -76,7 +83,7 @@ export default function AddDataToCognee({ datasets, refreshDatasets, useCloud = Add new data to a dataset? -
Please select a dataset to add data in.
If you don't have any, don't worry, we will create one for you.
+
Please select a {useCloud ? "cloud" : "local"} dataset to add data in.
If you don't have any, don't worry, we will create one for you.
setRunInstance(event.currentTarget.value)} className="!bg-transparent outline-none cursor-pointer !hover:bg-gray-50"> + {isCloudEnvironment() ? ( +
+ cloud cognee +
+ ) : ( +
+ local cognee +
+ )} + {/* + */}
diff --git a/cognee-mcp/pyproject.toml b/cognee-mcp/pyproject.toml index 8bde50841..a1ee22985 100644 --- a/cognee-mcp/pyproject.toml +++ b/cognee-mcp/pyproject.toml @@ -7,8 +7,8 @@ requires-python = ">=3.10" dependencies = [ # For local cognee repo usage remove comment bellow and add absolute path to cognee. Then run `uv sync --reinstall` in the mcp folder on local cognee changes. -# "cognee[postgres,codegraph,gemini,huggingface,docs,neo4j] @ file:/Users/vasilije/Projects/tiktok/cognee", - "cognee[postgres,codegraph,gemini,huggingface,docs,neo4j]==0.2.4", + #"cognee[postgres,codegraph,gemini,huggingface,docs,neo4j] @ file:/Users/igorilic/Desktop/cognee", + "cognee[postgres,codegraph,gemini,huggingface,docs,neo4j]==0.3.2", "fastmcp>=2.10.0,<3.0.0", "mcp>=1.12.0,<2.0.0", "uv>=0.6.3,<1.0.0", diff --git a/cognee-mcp/src/server.py b/cognee-mcp/src/server.py index 9e55b9707..9393fe71b 100755 --- a/cognee-mcp/src/server.py +++ b/cognee-mcp/src/server.py @@ -22,7 +22,7 @@ from cognee.modules.storage.utils import JSONEncoder try: - from codingagents.coding_rule_associations import ( + from cognee.tasks.codingagents.coding_rule_associations import ( add_rule_associations, get_existing_rules, ) diff --git a/cognee-mcp/uv.lock b/cognee-mcp/uv.lock index dd2797519..663f69d13 100644 --- a/cognee-mcp/uv.lock +++ b/cognee-mcp/uv.lock @@ -605,7 +605,7 @@ wheels = [ [[package]] name = "cognee" -version = "0.2.4" +version = "0.3.2" source = { registry = "https://pypi.org/simple" } dependencies = [ { name = "aiofiles" }, @@ -651,9 +651,9 @@ dependencies = [ { name = "tiktoken" }, { name = "typing-extensions" }, ] -sdist = { url = "https://files.pythonhosted.org/packages/da/b1/99c7f0c20cae101d4777bdc17b466bab58d0b4abfbb5d62c54d3babcc3ec/cognee-0.2.4.tar.gz", hash = "sha256:e8ac1c60cabb2e1d41db4f337a4dca3c7aa0c54d605d32e6087dba1c02b3beba", size = 13955686, upload-time = "2025-08-27T14:39:05.532Z" } +sdist = { url = "https://files.pythonhosted.org/packages/8f/d6/e1b10a2eeb7acf862bb29ea024e27fea66ad8a9e53a9be3c6d91d8be1a28/cognee-0.3.2.tar.gz", hash = "sha256:3c069fa107c31a90ae1cb053590f2da739711d7348ee4c16f5b2b52f1545ae05", size = 14397526, upload-time = "2025-09-11T21:38:27.124Z" } wheels = [ - { url = "https://files.pythonhosted.org/packages/e8/78/24df77b88d719ba308281412ebeb17c37867333e16bd2d1da7e192c1dc5d/cognee-0.2.4-py3-none-any.whl", hash = "sha256:56ab83c18ec9d7b307dfa206fcef39bc036e893d13e5390212f730b5204e3ae1", size = 1433548, upload-time = "2025-08-27T14:38:56.986Z" }, + { url = "https://files.pythonhosted.org/packages/81/24/882a9887866704b8b00261f8ef1c38be8355faa7eb2ff52bdbb0e753d9f8/cognee-0.3.2-py3-none-any.whl", hash = "sha256:b7af185e563eb426989bd5edc24a4b9063b8fd9f2324093301af7379f2aaddae", size = 1519178, upload-time = "2025-09-11T21:38:24.528Z" }, ] [package.optional-dependencies] @@ -699,7 +699,7 @@ dev = [ [package.metadata] requires-dist = [ - { name = "cognee", extras = ["postgres", "codegraph", "gemini", "huggingface", "docs", "neo4j"], specifier = "==0.2.4" }, + { name = "cognee", extras = ["postgres", "codegraph", "gemini", "huggingface", "docs", "neo4j"], specifier = "==0.3.2" }, { name = "fastmcp", specifier = ">=2.10.0,<3.0.0" }, { name = "mcp", specifier = ">=1.12.0,<2.0.0" }, { name = "uv", specifier = ">=0.6.3,<1.0.0" }, diff --git a/cognee/api/v1/notebooks/routers/get_notebooks_router.py b/cognee/api/v1/notebooks/routers/get_notebooks_router.py index 1d2861bf7..832b72a94 100644 --- a/cognee/api/v1/notebooks/routers/get_notebooks_router.py +++ b/cognee/api/v1/notebooks/routers/get_notebooks_router.py @@ -31,7 +31,8 @@ def get_notebooks_router(): @router.get("") async def get_notebooks_endpoint(user: User = Depends(get_authenticated_user)): - return await get_notebooks(user.id) + async with get_async_session() as session: + return await get_notebooks(user.id, session) @router.post("") async def create_notebook_endpoint( diff --git a/cognee/api/v1/search/search.py b/cognee/api/v1/search/search.py index 0e7cb6d85..dcebce012 100644 --- a/cognee/api/v1/search/search.py +++ b/cognee/api/v1/search/search.py @@ -22,7 +22,7 @@ async def search( node_type: Optional[Type] = NodeSet, node_name: Optional[List[str]] = None, save_interaction: bool = False, - last_k: Optional[int] = None, + last_k: Optional[int] = 1, only_context: bool = False, use_combined_context: bool = False, ) -> Union[List[SearchResult], CombinedSearchResult]: diff --git a/cognee/infrastructure/databases/relational/sqlalchemy/SqlAlchemyAdapter.py b/cognee/infrastructure/databases/relational/sqlalchemy/SqlAlchemyAdapter.py index 9369c0653..88d2abc7e 100644 --- a/cognee/infrastructure/databases/relational/sqlalchemy/SqlAlchemyAdapter.py +++ b/cognee/infrastructure/databases/relational/sqlalchemy/SqlAlchemyAdapter.py @@ -58,8 +58,8 @@ class SQLAlchemyAdapter: else: self.engine = create_async_engine( connection_string, - pool_size=5, - max_overflow=10, + pool_size=20, + max_overflow=20, pool_recycle=280, pool_pre_ping=True, pool_timeout=280, diff --git a/cognee/infrastructure/databases/vector/chromadb/ChromaDBAdapter.py b/cognee/infrastructure/databases/vector/chromadb/ChromaDBAdapter.py index aec33abe2..3d707b2f7 100644 --- a/cognee/infrastructure/databases/vector/chromadb/ChromaDBAdapter.py +++ b/cognee/infrastructure/databases/vector/chromadb/ChromaDBAdapter.py @@ -83,7 +83,7 @@ def process_data_for_chroma(data): elif isinstance(value, list): # Store lists as JSON strings with special prefix processed_data[f"{key}__list"] = json.dumps(value) - elif isinstance(value, (str, int, float, bool)) or value is None: + elif isinstance(value, (str, int, float, bool)): processed_data[key] = value else: processed_data[key] = str(value) @@ -553,8 +553,4 @@ class ChromaDBAdapter(VectorDBInterface): Returns a list of collection names. """ client = await self.get_connection() - collections = await client.list_collections() - return [ - collection.name if hasattr(collection, "name") else collection["name"] - for collection in collections - ] + return await client.list_collections() diff --git a/cognee/infrastructure/databases/vector/config.py b/cognee/infrastructure/databases/vector/config.py index f8fad473e..23678cca4 100644 --- a/cognee/infrastructure/databases/vector/config.py +++ b/cognee/infrastructure/databases/vector/config.py @@ -39,7 +39,7 @@ class VectorConfig(BaseSettings): values.vector_db_url = ensure_absolute_path( values.vector_db_url, ) - else: + elif not values.vector_db_url: # Default path databases_directory_path = os.path.join(base_config.system_root_directory, "databases") values.vector_db_url = os.path.join(databases_directory_path, "cognee.lancedb") diff --git a/cognee/infrastructure/databases/vector/embeddings/OllamaEmbeddingEngine.py b/cognee/infrastructure/databases/vector/embeddings/OllamaEmbeddingEngine.py index e1237a657..cf56dba1f 100644 --- a/cognee/infrastructure/databases/vector/embeddings/OllamaEmbeddingEngine.py +++ b/cognee/infrastructure/databases/vector/embeddings/OllamaEmbeddingEngine.py @@ -94,10 +94,8 @@ class OllamaEmbeddingEngine(EmbeddingEngine): """ Internal method to call the Ollama embeddings endpoint for a single prompt. """ - payload = { - "model": self.model, - "prompt": prompt, - } + payload = {"model": self.model, "prompt": prompt, "input": prompt} + headers = {} api_key = os.getenv("LLM_API_KEY") if api_key: diff --git a/cognee/infrastructure/llm/structured_output_framework/litellm_instructor/llm/anthropic/adapter.py b/cognee/infrastructure/llm/structured_output_framework/litellm_instructor/llm/anthropic/adapter.py index 103ac5e08..b079924be 100644 --- a/cognee/infrastructure/llm/structured_output_framework/litellm_instructor/llm/anthropic/adapter.py +++ b/cognee/infrastructure/llm/structured_output_framework/litellm_instructor/llm/anthropic/adapter.py @@ -12,6 +12,7 @@ from cognee.infrastructure.llm.structured_output_framework.litellm_instructor.ll ) from cognee.infrastructure.llm.LLMGateway import LLMGateway +from cognee.infrastructure.llm.config import get_llm_config class AnthropicAdapter(LLMInterface): @@ -27,7 +28,8 @@ class AnthropicAdapter(LLMInterface): import anthropic self.aclient = instructor.patch( - create=anthropic.AsyncAnthropic().messages.create, mode=instructor.Mode.ANTHROPIC_TOOLS + create=anthropic.AsyncAnthropic(api_key=get_llm_config().llm_api_key).messages.create, + mode=instructor.Mode.ANTHROPIC_TOOLS, ) self.model = model @@ -57,7 +59,7 @@ class AnthropicAdapter(LLMInterface): return await self.aclient( model=self.model, - max_completion_tokens=4096, + max_tokens=4096, max_retries=5, messages=[ { diff --git a/cognee/infrastructure/utils/run_async.py b/cognee/infrastructure/utils/run_async.py index 5480ea110..b6b428fc8 100644 --- a/cognee/infrastructure/utils/run_async.py +++ b/cognee/infrastructure/utils/run_async.py @@ -1,13 +1,18 @@ import asyncio from functools import partial +import inspect async def run_async(func, *args, loop=None, executor=None, **kwargs): if loop is None: try: - running_loop = asyncio.get_running_loop() + loop = asyncio.get_running_loop() except RuntimeError: - running_loop = asyncio.get_event_loop() + loop = asyncio.get_event_loop() - pfunc = partial(func, *args, **kwargs) - return await running_loop.run_in_executor(executor, pfunc) + if "loop" in inspect.signature(func).parameters: + pfunc = partial(func, *args, loop=loop, **kwargs) + else: + pfunc = partial(func, *args, **kwargs) + + return await loop.run_in_executor(executor, pfunc) diff --git a/cognee/infrastructure/utils/run_sync.py b/cognee/infrastructure/utils/run_sync.py index 913df4666..aa5e28b2e 100644 --- a/cognee/infrastructure/utils/run_sync.py +++ b/cognee/infrastructure/utils/run_sync.py @@ -2,16 +2,17 @@ import asyncio import threading -def run_sync(coro, timeout=None): +def run_sync(coro, running_loop=None, timeout=None): result = None exception = None def runner(): - nonlocal result, exception + nonlocal result, exception, running_loop try: try: - running_loop = asyncio.get_running_loop() + if not running_loop: + running_loop = asyncio.get_running_loop() result = asyncio.run_coroutine_threadsafe(coro, running_loop).result(timeout) except RuntimeError: diff --git a/cognee/modules/notebooks/methods/get_notebook.py b/cognee/modules/notebooks/methods/get_notebook.py index ca666edaa..a3d62e02f 100644 --- a/cognee/modules/notebooks/methods/get_notebook.py +++ b/cognee/modules/notebooks/methods/get_notebook.py @@ -1,6 +1,6 @@ from uuid import UUID from typing import Optional -from sqlalchemy import select +from sqlalchemy import and_, select from sqlalchemy.ext.asyncio import AsyncSession from cognee.infrastructure.databases.relational import with_async_session @@ -15,7 +15,7 @@ async def get_notebook( session: AsyncSession, ) -> Optional[Notebook]: result = await session.execute( - select(Notebook).where(Notebook.owner_id == user_id and Notebook.id == notebook_id) + select(Notebook).where(and_(Notebook.owner_id == user_id, Notebook.id == notebook_id)) ) return result.scalar() diff --git a/cognee/modules/notebooks/methods/update_notebook.py b/cognee/modules/notebooks/methods/update_notebook.py index 4d194202f..8d01a06f3 100644 --- a/cognee/modules/notebooks/methods/update_notebook.py +++ b/cognee/modules/notebooks/methods/update_notebook.py @@ -1,4 +1,3 @@ -from typing import Callable, AsyncContextManager from sqlalchemy.ext.asyncio import AsyncSession from cognee.infrastructure.databases.relational import with_async_session diff --git a/cognee/modules/notebooks/operations/run_in_local_sandbox.py b/cognee/modules/notebooks/operations/run_in_local_sandbox.py index b0c4da4b6..071deafb7 100644 --- a/cognee/modules/notebooks/operations/run_in_local_sandbox.py +++ b/cognee/modules/notebooks/operations/run_in_local_sandbox.py @@ -5,16 +5,18 @@ import traceback def wrap_in_async_handler(user_code: str) -> str: return ( - "from cognee.infrastructure.utils.run_sync import run_sync\n\n" - "async def __user_main__():\n" + "import asyncio\n" + + "asyncio.set_event_loop(running_loop)\n\n" + + "from cognee.infrastructure.utils.run_sync import run_sync\n\n" + + "async def __user_main__():\n" + "\n".join(" " + line for line in user_code.strip().split("\n")) + "\n" - " globals().update(locals())\n\n" - "run_sync(__user_main__())\n" + + " globals().update(locals())\n\n" + + "run_sync(__user_main__(), running_loop)\n" ) -def run_in_local_sandbox(code, environment=None): +def run_in_local_sandbox(code, environment=None, loop=None): environment = environment or {} code = wrap_in_async_handler(code.replace("\xa0", "\n")) @@ -31,6 +33,7 @@ def run_in_local_sandbox(code, environment=None): printOutput.append(output) environment["print"] = customPrintFunction + environment["running_loop"] = loop try: exec(code, environment) diff --git a/cognee/modules/retrieval/graph_completion_context_extension_retriever.py b/cognee/modules/retrieval/graph_completion_context_extension_retriever.py index f4c37fc93..6aca21808 100644 --- a/cognee/modules/retrieval/graph_completion_context_extension_retriever.py +++ b/cognee/modules/retrieval/graph_completion_context_extension_retriever.py @@ -48,7 +48,7 @@ class GraphCompletionContextExtensionRetriever(GraphCompletionRetriever): query: str, context: Optional[List[Edge]] = None, context_extension_rounds=4, - ) -> str: + ) -> List[str]: """ Extends the context for a given query by retrieving related triplets and generating new completions based on them. diff --git a/cognee/modules/retrieval/graph_completion_cot_retriever.py b/cognee/modules/retrieval/graph_completion_cot_retriever.py index f51433751..16d573351 100644 --- a/cognee/modules/retrieval/graph_completion_cot_retriever.py +++ b/cognee/modules/retrieval/graph_completion_cot_retriever.py @@ -58,7 +58,7 @@ class GraphCompletionCotRetriever(GraphCompletionRetriever): query: str, context: Optional[List[Edge]] = None, max_iter=4, - ) -> str: + ) -> List[str]: """ Generate completion responses based on a user query and contextual information. diff --git a/cognee/modules/retrieval/graph_completion_retriever.py b/cognee/modules/retrieval/graph_completion_retriever.py index 29b1e9d19..cd4944ca9 100644 --- a/cognee/modules/retrieval/graph_completion_retriever.py +++ b/cognee/modules/retrieval/graph_completion_retriever.py @@ -135,7 +135,7 @@ class GraphCompletionRetriever(BaseGraphRetriever): self, query: str, context: Optional[List[Edge]] = None, - ) -> Any: + ) -> List[str]: """ Generates a completion using graph connections context based on a query. diff --git a/cognee/modules/retrieval/temporal_retriever.py b/cognee/modules/retrieval/temporal_retriever.py index 36cdbd33f..c5fe2094c 100644 --- a/cognee/modules/retrieval/temporal_retriever.py +++ b/cognee/modules/retrieval/temporal_retriever.py @@ -136,7 +136,7 @@ class TemporalRetriever(GraphCompletionRetriever): return self.descriptions_to_string(top_k_events) - async def get_completion(self, query: str, context: Optional[str] = None) -> str: + async def get_completion(self, query: str, context: Optional[str] = None) -> List[str]: """Generates a response using the query and optional context.""" if not context: context = await self.get_context(query=query) diff --git a/cognee/modules/retrieval/user_qa_feedback.py b/cognee/modules/retrieval/user_qa_feedback.py index f667f785f..21e3d8e59 100644 --- a/cognee/modules/retrieval/user_qa_feedback.py +++ b/cognee/modules/retrieval/user_qa_feedback.py @@ -1,4 +1,4 @@ -from typing import Any, Optional, List +from typing import Optional, List from uuid import NAMESPACE_OID, uuid5, UUID from cognee.infrastructure.databases.graph import get_graph_engine diff --git a/cognee/modules/search/methods/search.py b/cognee/modules/search/methods/search.py index 0c236d896..65efafb4c 100644 --- a/cognee/modules/search/methods/search.py +++ b/cognee/modules/search/methods/search.py @@ -136,12 +136,19 @@ async def search( if os.getenv("ENABLE_BACKEND_ACCESS_CONTROL", "false").lower() == "true": return_value = [] for search_result in search_results: - result, context, datasets = search_result + prepared_search_results = await prepare_search_result(search_result) + + result = prepared_search_results["result"] + graphs = prepared_search_results["graphs"] + context = prepared_search_results["context"] + datasets = prepared_search_results["datasets"] + return_value.append( { - "search_result": result, + "search_result": [result] if result else None, "dataset_id": datasets[0].id, "dataset_name": datasets[0].name, + "graphs": graphs, } ) return return_value @@ -155,14 +162,6 @@ async def search( return return_value[0] else: return return_value - # return [ - # SearchResult( - # search_result=result, - # dataset_id=datasets[min(index, len(datasets) - 1)].id if datasets else None, - # dataset_name=datasets[min(index, len(datasets) - 1)].name if datasets else None, - # ) - # for index, (result, _, datasets) in enumerate(search_results) - # ] async def authorized_search( @@ -208,11 +207,11 @@ async def authorized_search( context = {} datasets: List[Dataset] = [] - for _, search_context, datasets in search_responses: - for dataset in datasets: + for _, search_context, search_datasets in search_responses: + for dataset in search_datasets: context[str(dataset.id)] = search_context - datasets.extend(datasets) + datasets.extend(search_datasets) specific_search_tools = await get_search_type_tools( query_type=query_type, diff --git a/cognee/modules/search/utils/prepare_search_result.py b/cognee/modules/search/utils/prepare_search_result.py index 6165e3166..b854a318d 100644 --- a/cognee/modules/search/utils/prepare_search_result.py +++ b/cognee/modules/search/utils/prepare_search_result.py @@ -1,40 +1,62 @@ from typing import List, cast +from uuid import uuid5, NAMESPACE_OID from cognee.modules.graph.utils import resolve_edges_to_text from cognee.modules.graph.cognee_graph.CogneeGraphElements import Edge +from cognee.modules.search.types.SearchResult import SearchResultDataset from cognee.modules.search.utils.transform_context_to_graph import transform_context_to_graph +from cognee.modules.search.utils.transform_insights_to_graph import transform_insights_to_graph async def prepare_search_result(search_result): - result, context, datasets = search_result + results, context, datasets = search_result graphs = None result_graph = None context_texts = {} - if isinstance(context, List) and len(context) > 0 and isinstance(context[0], Edge): + if isinstance(datasets, list) and len(datasets) == 0: + datasets = [ + SearchResultDataset( + id=uuid5(NAMESPACE_OID, "*"), + name="all available datasets", + ) + ] + + if ( + isinstance(context, List) + and len(context) > 0 + and isinstance(context[0], tuple) + and context[0][1].get("relationship_name") + ): + context_graph = transform_insights_to_graph(context) + graphs = { + ", ".join([dataset.name for dataset in datasets]): context_graph, + } + results = None + elif isinstance(context, List) and len(context) > 0 and isinstance(context[0], Edge): context_graph = transform_context_to_graph(context) graphs = { - "*": context_graph, + ", ".join([dataset.name for dataset in datasets]): context_graph, } context_texts = { - "*": await resolve_edges_to_text(context), + ", ".join([dataset.name for dataset in datasets]): await resolve_edges_to_text(context), } elif isinstance(context, str): context_texts = { - "*": context, + ", ".join([dataset.name for dataset in datasets]): context, } elif isinstance(context, List) and len(context) > 0 and isinstance(context[0], str): context_texts = { - "*": "\n".join(cast(List[str], context)), + ", ".join([dataset.name for dataset in datasets]): "\n".join(cast(List[str], context)), } - if isinstance(result, List) and len(result) > 0 and isinstance(result[0], Edge): - result_graph = transform_context_to_graph(result) + if isinstance(results, List) and len(results) > 0 and isinstance(results[0], Edge): + result_graph = transform_context_to_graph(results) return { - "result": result_graph or result, + "result": result_graph or results[0] if results and len(results) == 1 else results, "graphs": graphs, "context": context_texts, "datasets": datasets, diff --git a/cognee/modules/search/utils/transform_context_to_graph.py b/cognee/modules/search/utils/transform_context_to_graph.py index 0bc889575..4fc722dc6 100644 --- a/cognee/modules/search/utils/transform_context_to_graph.py +++ b/cognee/modules/search/utils/transform_context_to_graph.py @@ -14,7 +14,7 @@ def transform_context_to_graph(context: List[Edge]): if "name" in triplet.node1.attributes else triplet.node1.id, "type": triplet.node1.attributes["type"], - "attributes": triplet.node2.attributes, + "attributes": triplet.node1.attributes, } nodes[triplet.node2.id] = { "id": triplet.node2.id, diff --git a/cognee/modules/search/utils/transform_insights_to_graph.py b/cognee/modules/search/utils/transform_insights_to_graph.py new file mode 100644 index 000000000..e01a444cd --- /dev/null +++ b/cognee/modules/search/utils/transform_insights_to_graph.py @@ -0,0 +1,28 @@ +from typing import Dict, List, Tuple + + +def transform_insights_to_graph(context: List[Tuple[Dict, Dict, Dict]]): + nodes = {} + edges = {} + + for triplet in context: + nodes[triplet[0]["id"]] = { + "id": triplet[0]["id"], + "label": triplet[0]["name"] if "name" in triplet[0] else triplet[0]["id"], + "type": triplet[0]["type"], + } + nodes[triplet[2]["id"]] = { + "id": triplet[2]["id"], + "label": triplet[2]["name"] if "name" in triplet[2] else triplet[2]["id"], + "type": triplet[2]["type"], + } + edges[f"{triplet[0]['id']}_{triplet[1]['relationship_name']}_{triplet[2]['id']}"] = { + "source": triplet[0]["id"], + "target": triplet[2]["id"], + "label": triplet[1]["relationship_name"], + } + + return { + "nodes": list(nodes.values()), + "edges": list(edges.values()), + } diff --git a/cognee/tasks/temporal_graph/models.py b/cognee/tasks/temporal_graph/models.py index ef5cd42c9..8e1fd5658 100644 --- a/cognee/tasks/temporal_graph/models.py +++ b/cognee/tasks/temporal_graph/models.py @@ -3,12 +3,17 @@ from pydantic import BaseModel, Field class Timestamp(BaseModel): - year: int = Field(..., ge=1, le=9999) - month: int = Field(..., ge=1, le=12) - day: int = Field(..., ge=1, le=31) - hour: int = Field(..., ge=0, le=23) - minute: int = Field(..., ge=0, le=59) - second: int = Field(..., ge=0, le=59) + year: int = Field( + ..., + ge=1, + le=9999, + description="Always required. If only a year is known, use it.", + ) + month: int = Field(1, ge=1, le=12, description="If unknown, default to 1") + day: int = Field(1, ge=1, le=31, description="If unknown, default to 1") + hour: int = Field(0, ge=0, le=23, description="If unknown, default to 0") + minute: int = Field(0, ge=0, le=59, description="If unknown, default to 0") + second: int = Field(0, ge=0, le=59, description="If unknown, default to 0") class Interval(BaseModel): diff --git a/cognee/tests/cli_tests/cli_unit_tests/test_cli_main.py b/cognee/tests/cli_tests/cli_unit_tests/test_cli_main.py index 44f23ea5c..1ad8eb09e 100644 --- a/cognee/tests/cli_tests/cli_unit_tests/test_cli_main.py +++ b/cognee/tests/cli_tests/cli_unit_tests/test_cli_main.py @@ -49,7 +49,7 @@ class TestCliMain: def test_main_no_command(self, mock_create_parser): """Test main function when no command is provided""" mock_parser = MagicMock() - mock_parser.parse_args.return_value = MagicMock(command=None) + mock_parser.parse_args.return_value = MagicMock(command=None, spec={}) mock_create_parser.return_value = (mock_parser, {}) result = main() @@ -64,7 +64,7 @@ class TestCliMain: mock_command.execute.return_value = None mock_parser = MagicMock() - mock_args = MagicMock(command="test") + mock_args = MagicMock(command="test", spec={}) mock_parser.parse_args.return_value = mock_args mock_create_parser.return_value = (mock_parser, {"test": mock_command}) @@ -84,7 +84,7 @@ class TestCliMain: mock_command.execute.side_effect = CliCommandException("Test error", error_code=2) mock_parser = MagicMock() - mock_args = MagicMock(command="test") + mock_args = MagicMock(command="test", spec={}) mock_parser.parse_args.return_value = mock_args mock_create_parser.return_value = (mock_parser, {"test": mock_command}) @@ -103,7 +103,7 @@ class TestCliMain: mock_command.execute.side_effect = Exception("Generic error") mock_parser = MagicMock() - mock_args = MagicMock(command="test") + mock_args = MagicMock(command="test", spec={}) mock_parser.parse_args.return_value = mock_args mock_create_parser.return_value = (mock_parser, {"test": mock_command}) @@ -126,7 +126,7 @@ class TestCliMain: mock_command.execute.side_effect = test_exception mock_parser = MagicMock() - mock_args = MagicMock(command="test") + mock_args = MagicMock(command="test", spec={}) mock_parser.parse_args.return_value = mock_args mock_create_parser.return_value = (mock_parser, {"test": mock_command}) diff --git a/cognee/tests/test_temporal_graph.py b/cognee/tests/test_temporal_graph.py index 675a01689..4501deed8 100644 --- a/cognee/tests/test_temporal_graph.py +++ b/cognee/tests/test_temporal_graph.py @@ -97,7 +97,7 @@ async def main(): f"Expected exactly one DocumentChunk, but found {type_counts.get('DocumentChunk', 0)}" ) - assert type_counts.get("Entity", 0) >= 20, ( + assert type_counts.get("Entity", 0) >= 10, ( f"Expected multiple entities (assert is set to 20), but found {type_counts.get('Entity', 0)}" ) @@ -105,52 +105,24 @@ async def main(): f"Expected multiple entity types, but found {type_counts.get('EntityType', 0)}" ) - assert type_counts.get("Event", 0) >= 20, ( + assert type_counts.get("Event", 0) >= 10, ( f"Expected multiple events (assert is set to 20), but found {type_counts.get('Event', 0)}" ) - assert type_counts.get("Timestamp", 0) >= 20, ( - f"Expected multiple timestamps (assert is set to 20), but found {type_counts.get('Timestamp', 0)}" + assert type_counts.get("Timestamp", 0) >= 10, ( + f"Expected multiple timestamps (assert is set to 10), but found {type_counts.get('Timestamp', 0)}" ) - assert type_counts.get("Interval", 0) >= 2, ( - f"Expected multiple intervals, but found {type_counts.get('Interval', 0)}" - ) - - assert edge_type_counts.get("contains", 0) >= 20, ( + assert edge_type_counts.get("contains", 0) >= 10, ( f"Expected multiple 'contains' edge, but found {edge_type_counts.get('contains', 0)}" ) - assert edge_type_counts.get("is_a", 0) >= 20, ( + assert edge_type_counts.get("is_a", 0) >= 10, ( f"Expected multiple 'is_a' edge, but found {edge_type_counts.get('is_a', 0)}" ) - assert edge_type_counts.get("during", 0) == type_counts.get("Interval", 0), ( - "Expected the same amount of during and interval objects in the graph" - ) - - assert edge_type_counts.get("during", 0) == type_counts.get("Interval", 0), ( - "Expected the same amount of during and interval objects in the graph" - ) - - assert edge_type_counts.get("time_from", 0) == type_counts.get("Interval", 0), ( - "Expected the same amount of time_from and interval objects in the graph" - ) - - assert edge_type_counts.get("time_to", 0) == type_counts.get("Interval", 0), ( - "Expected the same amount of time_to and interval objects in the graph" - ) - retriever = TemporalRetriever() - result_before = await retriever.extract_time_from_query("What happened before 1890?") - - assert result_before[0] is None - - result_after = await retriever.extract_time_from_query("What happened after 1891?") - - assert result_after[1] is None - result_between = await retriever.extract_time_from_query("What happened between 1890 and 1900?") assert result_between[1] diff --git a/poetry.lock b/poetry.lock index de2be7768..873ee3056 100644 --- a/poetry.lock +++ b/poetry.lock @@ -246,30 +246,30 @@ files = [ [[package]] name = "anthropic" -version = "0.26.1" +version = "0.67.0" description = "The official Python library for the anthropic API" optional = true -python-versions = ">=3.7" +python-versions = ">=3.8" groups = ["main"] markers = "extra == \"anthropic\" or extra == \"deepeval\"" files = [ - {file = "anthropic-0.26.1-py3-none-any.whl", hash = "sha256:2812b9b250b551ed8a1f0a7e6ae3f005654098994f45ebca5b5808bd154c9628"}, - {file = "anthropic-0.26.1.tar.gz", hash = "sha256:26680ff781a6f678a30a1dccd0743631e602b23a47719439ffdef5335fa167d8"}, + {file = "anthropic-0.67.0-py3-none-any.whl", hash = "sha256:f80a81ec1132c514215f33d25edeeab1c4691ad5361b391ebb70d528b0605b55"}, + {file = "anthropic-0.67.0.tar.gz", hash = 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