refactor: move url data fetching logic into save_data_item_to_storage
This commit is contained in:
parent
17b33ab443
commit
d7417d9b06
8 changed files with 91 additions and 155 deletions
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@ -31,6 +31,7 @@ async def add(
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incremental_loading: bool = True,
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data_per_batch: Optional[int] = 20,
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loaders_config: dict[LoaderInterface, dict] = {},
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fetchers_config: dict[str, Any] = {},
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):
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"""
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Add data to Cognee for knowledge graph processing.
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@ -179,6 +180,7 @@ async def add(
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dataset_id,
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preferred_loaders,
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loaders_config,
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fetchers_config,
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),
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]
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@ -204,6 +206,7 @@ async def add(
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graph_db_config=graph_db_config,
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incremental_loading=incremental_loading,
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data_per_batch=data_per_batch,
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fetchers_config=fetchers_config,
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):
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pipeline_run_info = run_info
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@ -2,8 +2,6 @@ from cognee.infrastructure.loaders.LoaderInterface import LoaderInterface
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from typing import List
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from cognee.modules.ingestion.exceptions.exceptions import IngestionError
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from cognee.modules.ingestion import save_data_to_file
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from cognee.tasks.web_scraper.config import TavilyConfig, SoupCrawlerConfig
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from cognee.shared.logging_utils import get_logger
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logger = get_logger()
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@ -62,7 +60,7 @@ class WebUrlLoader(LoaderInterface):
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Load and process the file, returning standardized result.
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Args:
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file_path: Path to the file to be processed
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file_path: Path to the file to be processed (already saved by fetcher)
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file_stream: If file stream is provided it will be used to process file instead
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**kwargs: Additional loader-specific configuration
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@ -71,63 +69,5 @@ class WebUrlLoader(LoaderInterface):
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Raises:
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Exception: If file cannot be processed
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"""
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loaders_config = kwargs.get("loaders_config")
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if not isinstance(loaders_config, dict):
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raise IngestionError("loaders_config must be a valid dictionary")
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web_url_loader_config = loaders_config.get(self.loader_name)
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if not isinstance(web_url_loader_config, dict):
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raise IngestionError(f"{self.loader_name} configuration must be a valid dictionary")
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try:
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from cognee.context_global_variables import tavily_config, soup_crawler_config
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from cognee.tasks.web_scraper import fetch_page_content
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tavily_dict = web_url_loader_config.get("tavily_config")
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_tavily_config = TavilyConfig(**tavily_dict) if tavily_dict else None
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soup_dict = web_url_loader_config.get("soup_config")
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_soup_config = SoupCrawlerConfig(**soup_dict) if soup_dict else None
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# Set global configs for downstream access
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tavily_config.set(_tavily_config)
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soup_crawler_config.set(_soup_config)
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preferred_tool = "beautifulsoup" if _soup_config else "tavily"
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if preferred_tool == "tavily" and _tavily_config is None:
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raise IngestionError(
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message="TavilyConfig must be set on the ingestion context when fetching HTTP URLs without a SoupCrawlerConfig."
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)
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if preferred_tool == "beautifulsoup" and _soup_config is None:
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raise IngestionError(
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message="SoupCrawlerConfig must be set on the ingestion context when using the BeautifulSoup scraper."
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)
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logger.info(f"Starting web URL crawling for: {file_path}")
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logger.info(f"Using scraping tool: {preferred_tool}")
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data = await fetch_page_content(
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file_path,
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preferred_tool=preferred_tool,
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tavily_config=_tavily_config,
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soup_crawler_config=_soup_config,
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)
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logger.info(f"Successfully fetched content from {len(data)} URL(s)")
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logger.info("Processing and concatenating fetched content")
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content = ""
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for key, value in data.items():
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content += f"{key}:\n{value}\n\n"
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logger.info(f"Saving content to file (total size: {len(content)} characters)")
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stored_path = await save_data_to_file(content)
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logger.info(f"Successfully saved content to: {stored_path}")
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return stored_path
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except IngestionError:
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raise
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except Exception as e:
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raise IngestionError(
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message=f"Error ingesting webpage from URL {file_path}: {str(e)}"
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) from e
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return file_path
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@ -20,6 +20,7 @@ from cognee.modules.pipelines.layers.resolve_authorized_user_datasets import (
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from cognee.modules.pipelines.layers.check_pipeline_run_qualification import (
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check_pipeline_run_qualification,
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)
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from typing import Any
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logger = get_logger("cognee.pipeline")
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@ -36,6 +37,7 @@ async def run_pipeline(
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graph_db_config: dict = None,
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incremental_loading: bool = False,
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data_per_batch: int = 20,
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fetchers_config: dict[str, Any] = {},
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):
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validate_pipeline_tasks(tasks)
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await setup_and_check_environment(vector_db_config, graph_db_config)
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@ -52,6 +54,7 @@ async def run_pipeline(
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context={"dataset": dataset},
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incremental_loading=incremental_loading,
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data_per_batch=data_per_batch,
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fetchers_config=fetchers_config,
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):
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yield run_info
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@ -65,6 +68,7 @@ async def run_pipeline_per_dataset(
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context: dict = None,
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incremental_loading=False,
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data_per_batch: int = 20,
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fetchers_config: dict[str, Any] = {},
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):
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# Will only be used if ENABLE_BACKEND_ACCESS_CONTROL is set to True
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await set_database_global_context_variables(dataset.id, dataset.owner_id)
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@ -80,7 +84,15 @@ async def run_pipeline_per_dataset(
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return
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pipeline_run = run_tasks(
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tasks, dataset.id, data, user, pipeline_name, context, incremental_loading, data_per_batch
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tasks,
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dataset.id,
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data,
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user,
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pipeline_name,
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context,
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incremental_loading,
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data_per_batch,
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fetchers_config,
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)
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async for pipeline_run_info in pipeline_run:
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@ -60,6 +60,7 @@ async def run_tasks(
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context: dict = None,
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incremental_loading: bool = False,
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data_per_batch: int = 20,
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fetchers_config: dict[str, Any] = {},
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):
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if not user:
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user = await get_default_user()
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@ -106,6 +107,7 @@ async def run_tasks(
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context,
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user,
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incremental_loading,
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fetchers_config,
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)
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)
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for data_item in data_batch
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@ -39,6 +39,7 @@ async def run_tasks_data_item_incremental(
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pipeline_run_id: str,
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context: Optional[Dict[str, Any]],
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user: User,
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fetchers_config: dict[str, Any],
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) -> AsyncGenerator[Dict[str, Any], None]:
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"""
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Process a single data item with incremental loading support.
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@ -64,51 +65,36 @@ async def run_tasks_data_item_incremental(
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# If incremental_loading of data is set to True don't process documents already processed by pipeline
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# If data is being added to Cognee for the first time calculate the id of the data
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try:
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if not isinstance(data_item, Data):
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file_path = await save_data_item_to_storage(data_item)
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# Ingest data and add metadata
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async with open_data_file(file_path) as file:
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classified_data = ingestion.classify(file)
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# data_id is the hash of file contents + owner id to avoid duplicate data
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data_id = ingestion.identify(classified_data, user)
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else:
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# If data was already processed by Cognee get data id
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data_id = data_item.id
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if not isinstance(data_item, Data):
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file_path = await save_data_item_to_storage(data_item, fetchers_config)
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# Ingest data and add metadata
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async with open_data_file(file_path) as file:
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classified_data = ingestion.classify(file)
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# data_id is the hash of file contents + owner id to avoid duplicate data
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data_id = ingestion.identify(classified_data, user)
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else:
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# If data was already processed by Cognee get data id
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data_id = data_item.id
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# Check pipeline status, if Data already processed for pipeline before skip current processing
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async with db_engine.get_async_session() as session:
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data_point = (
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await session.execute(select(Data).filter(Data.id == data_id))
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).scalar_one_or_none()
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if data_point:
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if (
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data_point.pipeline_status.get(pipeline_name, {}).get(str(dataset.id))
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== DataItemStatus.DATA_ITEM_PROCESSING_COMPLETED
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):
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yield {
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"run_info": PipelineRunAlreadyCompleted(
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pipeline_run_id=pipeline_run_id,
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dataset_id=dataset.id,
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dataset_name=dataset.name,
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),
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"data_id": data_id,
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}
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return
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except UnsupportedPathSchemeError as e:
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logger.warning(f"data_item does not support incremental loading: {str(e)}")
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# Fall back to regular processing since incremental loading is not supported
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async for result in run_tasks_data_item_regular(
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data_item=data_item,
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dataset=dataset,
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tasks=tasks,
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pipeline_id=pipeline_id,
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pipeline_run_id=pipeline_run_id,
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context=context,
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user=user,
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):
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yield result
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return
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# Check pipeline status, if Data already processed for pipeline before skip current processing
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async with db_engine.get_async_session() as session:
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data_point = (
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await session.execute(select(Data).filter(Data.id == data_id))
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).scalar_one_or_none()
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if data_point:
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if (
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data_point.pipeline_status.get(pipeline_name, {}).get(str(dataset.id))
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== DataItemStatus.DATA_ITEM_PROCESSING_COMPLETED
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):
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yield {
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"run_info": PipelineRunAlreadyCompleted(
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pipeline_run_id=pipeline_run_id,
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dataset_id=dataset.id,
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dataset_name=dataset.name,
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),
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"data_id": data_id,
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}
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return
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try:
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# Process data based on data_item and list of tasks
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@ -225,6 +211,7 @@ async def run_tasks_data_item(
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context: Optional[Dict[str, Any]],
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user: User,
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incremental_loading: bool,
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fetchers_config: dict[str, Any] = {},
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) -> Optional[Dict[str, Any]]:
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"""
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Process a single data item, choosing between incremental and regular processing.
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@ -259,6 +246,7 @@ async def run_tasks_data_item(
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pipeline_run_id=pipeline_run_id,
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context=context,
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user=user,
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fetchers_config=fetchers_config,
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):
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pass
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else:
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@ -31,6 +31,7 @@ async def ingest_data(
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dataset_id: UUID = None,
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preferred_loaders: List[str] = None,
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loaders_config: dict[LoaderInterface, dict] = {},
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fetchers_config: dict[str, Any] = {},
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):
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if not user:
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user = await get_default_user()
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@ -80,16 +81,10 @@ async def ingest_data(
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dataset_data_map = {str(data.id): True for data in dataset_data}
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for data_item in data:
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try:
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# Get file path of data item or create a file if it doesn't exist
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original_file_path = await save_data_item_to_storage(data_item)
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# Transform file path to be OS usable
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actual_file_path = get_data_file_path(original_file_path)
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except UnsupportedPathSchemeError:
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# This data_item (e.g., HTTP/HTTPS URL) should be passed directly to the loader
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# skip save_data_item_to_storage and get_data_file_path
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actual_file_path = data_item
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original_file_path = None # we don't have an original file path
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# Get file path of data item or create a file if it doesn't exist
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original_file_path = await save_data_item_to_storage(data_item, fetchers_config)
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# Transform file path to be OS usable
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actual_file_path = get_data_file_path(original_file_path)
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# Store all input data as text files in Cognee data storage
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cognee_storage_file_path, loader_engine = await data_item_to_text_file(
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@ -99,26 +94,15 @@ async def ingest_data(
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)
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# Find metadata from original file
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if original_file_path is not None:
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# Standard flow: extract metadata from both original and stored files
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async with open_data_file(original_file_path) as file:
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classified_data = ingestion.classify(file)
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data_id = ingestion.identify(classified_data, user)
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original_file_metadata = classified_data.get_metadata()
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# Standard flow: extract metadata from both original and stored files
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async with open_data_file(original_file_path) as file:
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classified_data = ingestion.classify(file)
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data_id = ingestion.identify(classified_data, user)
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original_file_metadata = classified_data.get_metadata()
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async with open_data_file(cognee_storage_file_path) as file:
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classified_data = ingestion.classify(file)
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storage_file_metadata = classified_data.get_metadata()
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else:
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# Alternative flow (e.g., URLs): extract metadata once from stored file
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async with open_data_file(cognee_storage_file_path) as file:
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classified_data = ingestion.classify(file)
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data_id = ingestion.identify(classified_data, user)
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original_file_metadata = classified_data.get_metadata()
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# Override file_path to be the actual data_item (e.g., URL) ?
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original_file_metadata["file_path"] = actual_file_path
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# Storage metadata is the same as original
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storage_file_metadata = original_file_metadata.copy()
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async with open_data_file(cognee_storage_file_path) as file:
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classified_data = ingestion.classify(file)
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storage_file_metadata = classified_data.get_metadata()
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from sqlalchemy import select
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@ -9,6 +9,8 @@ from cognee.modules.ingestion import save_data_to_file
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from cognee.shared.logging_utils import get_logger
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from pydantic_settings import BaseSettings, SettingsConfigDict
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from cognee.tasks.ingestion.data_fetchers.web_url_fetcher import WebUrlFetcher
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logger = get_logger()
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@ -22,7 +24,9 @@ class SaveDataSettings(BaseSettings):
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settings = SaveDataSettings()
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async def save_data_item_to_storage(data_item: Union[BinaryIO, str, Any]) -> str:
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async def save_data_item_to_storage(
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data_item: Union[BinaryIO, str, Any], fetchers_config: dict[str, Any] = {}
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) -> str:
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if "llama_index" in str(type(data_item)):
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# Dynamic import is used because the llama_index module is optional.
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from .transform_data import get_data_from_llama_index
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@ -57,9 +61,8 @@ async def save_data_item_to_storage(data_item: Union[BinaryIO, str, Any]) -> str
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if parsed_url.scheme == "s3":
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return data_item
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elif parsed_url.scheme == "http" or parsed_url.scheme == "https":
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raise UnsupportedPathSchemeError(
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message=f"HTTP/HTTPS URLs should be handled by loader, not by save_data_item_to_storage. Received: {data_item}"
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)
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fetcher = WebUrlFetcher()
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return await fetcher.fetch(data_item, fetchers_config)
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# data is local file path
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elif parsed_url.scheme == "file":
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if settings.accept_local_file_path:
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@ -1,22 +1,28 @@
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from sys import exc_info
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import pytest
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import cognee
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from cognee.modules.ingestion.exceptions.exceptions import IngestionError
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@pytest.mark.asyncio
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async def test_add_fails_when_preferred_loader_not_specified():
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async def test_add_fails_when_web_url_fetcher_config_not_specified():
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from cognee.shared.logging_utils import setup_logging, ERROR
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setup_logging(log_level=ERROR)
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await cognee.prune.prune_data()
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await cognee.prune.prune_system(metadata=True)
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with pytest.raises(ValueError):
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with pytest.raises(IngestionError) as excinfo:
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await cognee.add(
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"https://en.wikipedia.org/wiki/Large_language_model",
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incremental_loading=False,
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)
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assert excinfo.value.message.startswith(
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"web_url_fetcher configuration must be a valid dictionary"
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)
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@pytest.mark.asyncio
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async def test_add_succesfully_adds_url_when_preferred_loader_specified():
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async def test_add_succesfully_adds_url_when_fetcher_config_specified():
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await cognee.prune.prune_data()
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await cognee.prune.prune_system(metadata=True)
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@ -27,8 +33,8 @@ async def test_add_succesfully_adds_url_when_preferred_loader_specified():
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"paragraphs": {"selector": "p", "all": True},
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}
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loaders_config = {
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"web_url_loader": {
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fetchers_config = {
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"web_url_fetcher": {
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"soup_config": {
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"max_depth": 1,
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"follow_links": False,
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|
|
@ -40,8 +46,8 @@ async def test_add_succesfully_adds_url_when_preferred_loader_specified():
|
|||
try:
|
||||
await cognee.add(
|
||||
"https://en.wikipedia.org/wiki/Large_language_model",
|
||||
preferred_loaders=["web_url_loader"],
|
||||
loaders_config=loaders_config,
|
||||
incremental_loading=False,
|
||||
fetchers_config=fetchers_config,
|
||||
)
|
||||
except Exception as e:
|
||||
pytest.fail(f"Failed to add url: {e}")
|
||||
|
|
@ -59,8 +65,8 @@ async def test_add_with_incremental_loading_works():
|
|||
"paragraphs": {"selector": "p", "all": True},
|
||||
}
|
||||
|
||||
loaders_config = {
|
||||
"web_url_loader": {
|
||||
fetchers_config = {
|
||||
"web_url_fetcher": {
|
||||
"soup_config": {
|
||||
"max_depth": 1,
|
||||
"follow_links": False,
|
||||
|
|
@ -71,9 +77,8 @@ async def test_add_with_incremental_loading_works():
|
|||
try:
|
||||
await cognee.add(
|
||||
"https://en.wikipedia.org/wiki/Large_language_model",
|
||||
preferred_loaders=["web_url_loader"],
|
||||
incremental_loading=True,
|
||||
loaders_config=loaders_config,
|
||||
fetchers_config=fetchers_config,
|
||||
)
|
||||
except Exception as e:
|
||||
pytest.fail(f"Failed to add url: {e}")
|
||||
|
|
@ -91,8 +96,8 @@ async def test_add_without_incremental_loading_works():
|
|||
"paragraphs": {"selector": "p", "all": True},
|
||||
}
|
||||
|
||||
loaders_config = {
|
||||
"web_url_loader": {
|
||||
fetchers_config = {
|
||||
"web_url_fetcher": {
|
||||
"soup_config": {
|
||||
"max_depth": 1,
|
||||
"follow_links": False,
|
||||
|
|
@ -103,9 +108,8 @@ async def test_add_without_incremental_loading_works():
|
|||
try:
|
||||
await cognee.add(
|
||||
"https://en.wikipedia.org/wiki/Large_language_model",
|
||||
preferred_loaders=["web_url_loader"],
|
||||
incremental_loading=False,
|
||||
loaders_config=loaders_config,
|
||||
fetchers_config=fetchers_config,
|
||||
)
|
||||
except Exception as e:
|
||||
pytest.fail(f"Failed to add url: {e}")
|
||||
|
|
|
|||
Loading…
Add table
Reference in a new issue