clean up tools list in mcp
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@ -14,7 +14,6 @@ import mcp.types as types
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from mcp.server import FastMCP
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from cognee.modules.storage.utils import JSONEncoder
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from starlette.responses import JSONResponse
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from starlette.middleware import Middleware
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from starlette.middleware.cors import CORSMiddleware
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import uvicorn
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@ -27,12 +26,10 @@ except ImportError:
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try:
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from cognee.tasks.codingagents.coding_rule_associations import (
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add_rule_associations,
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get_existing_rules,
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)
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except ModuleNotFoundError:
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from .codingagents.coding_rule_associations import (
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add_rule_associations,
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get_existing_rules,
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)
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@ -90,97 +87,6 @@ async def health_check(request):
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return JSONResponse({"status": "ok"})
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@mcp.tool()
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async def cognee_add_developer_rules(
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base_path: str = ".", graph_model_file: str = None, graph_model_name: str = None
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) -> list:
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"""
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Ingest core developer rule files into Cognee's memory layer.
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This function loads a predefined set of developer-related configuration,
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rule, and documentation files from the base repository and assigns them
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to the special 'developer_rules' node set in Cognee. It ensures these
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foundational files are always part of the structured memory graph.
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Parameters
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----------
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base_path : str
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Root path to resolve relative file paths. Defaults to current directory.
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graph_model_file : str, optional
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Optional path to a custom schema file for knowledge graph generation.
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graph_model_name : str, optional
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Optional class name to use from the graph_model_file schema.
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Returns
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-------
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list
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A message indicating how many rule files were scheduled for ingestion,
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and how to check their processing status.
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Notes
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-----
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- Each file is processed asynchronously in the background.
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- Files are attached to the 'developer_rules' node set.
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- Missing files are skipped with a logged warning.
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"""
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developer_rule_paths = [
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".cursorrules",
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".cursor/rules",
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".same/todos.md",
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".windsurfrules",
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".clinerules",
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"CLAUDE.md",
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".sourcegraph/memory.md",
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"AGENT.md",
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"AGENTS.md",
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]
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async def cognify_task(file_path: str) -> None:
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with redirect_stdout(sys.stderr):
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logger.info(f"Starting cognify for: {file_path}")
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try:
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await cognee_client.add(file_path, node_set=["developer_rules"])
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model = None
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if graph_model_file and graph_model_name:
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if cognee_client.use_api:
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logger.warning(
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"Custom graph models are not supported in API mode, ignoring."
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)
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else:
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from cognee.shared.data_models import KnowledgeGraph
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model = load_class(graph_model_file, graph_model_name)
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await cognee_client.cognify(graph_model=model)
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logger.info(f"Cognify finished for: {file_path}")
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except Exception as e:
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logger.error(f"Cognify failed for {file_path}: {str(e)}")
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raise ValueError(f"Failed to cognify: {str(e)}")
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tasks = []
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for rel_path in developer_rule_paths:
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abs_path = os.path.join(base_path, rel_path)
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if os.path.isfile(abs_path):
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tasks.append(asyncio.create_task(cognify_task(abs_path)))
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else:
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logger.warning(f"Skipped missing developer rule file: {abs_path}")
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log_file = get_log_file_location()
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return [
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types.TextContent(
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type="text",
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text=(
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f"Started cognify for {len(tasks)} developer rule files in background.\n"
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f"All are added to the `developer_rules` node set.\n"
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f"Use `cognify_status` or check logs at {log_file} to monitor progress."
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),
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)
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]
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@mcp.tool()
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async def cognify(
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data: str, graph_model_file: str = None, graph_model_name: str = None, custom_prompt: str = None
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@ -407,75 +313,6 @@ async def save_interaction(data: str) -> list:
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]
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@mcp.tool()
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async def codify(repo_path: str) -> list:
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"""
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Analyze and generate a code-specific knowledge graph from a software repository.
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This function launches a background task that processes the provided repository
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and builds a code knowledge graph. The function returns immediately while
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the processing continues in the background due to MCP timeout constraints.
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Parameters
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----------
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repo_path : str
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Path to the code repository to analyze. This can be a local file path or a
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relative path to a repository. The path should point to the root of the
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repository or a specific directory within it.
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Returns
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-------
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list
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A list containing a single TextContent object with information about the
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background task launch and how to check its status.
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Notes
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-----
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- The function launches a background task and returns immediately
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- The code graph generation may take significant time for larger repositories
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- Use the codify_status tool to check the progress of the operation
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- Process results are logged to the standard Cognee log file
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- All stdout is redirected to stderr to maintain MCP communication integrity
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"""
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if cognee_client.use_api:
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error_msg = "❌ Codify operation is not available in API mode. Please use direct mode for code graph pipeline."
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logger.error(error_msg)
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return [types.TextContent(type="text", text=error_msg)]
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async def codify_task(repo_path: str):
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# NOTE: MCP uses stdout to communicate, we must redirect all output
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# going to stdout ( like the print function ) to stderr.
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with redirect_stdout(sys.stderr):
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logger.info("Codify process starting.")
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from cognee.api.v1.cognify.code_graph_pipeline import run_code_graph_pipeline
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results = []
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async for result in run_code_graph_pipeline(repo_path, False):
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results.append(result)
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logger.info(result)
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if all(results):
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logger.info("Codify process finished succesfully.")
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else:
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logger.info("Codify process failed.")
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asyncio.create_task(codify_task(repo_path))
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log_file = get_log_file_location()
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text = (
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f"Background process launched due to MCP timeout limitations.\n"
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f"To check current codify status use the codify_status tool\n"
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f"or you can check the log file at: {log_file}"
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)
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return [
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types.TextContent(
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type="text",
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text=text,
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)
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]
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@mcp.tool()
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async def search(search_query: str, search_type: str) -> list:
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"""
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@ -630,45 +467,6 @@ async def search(search_query: str, search_type: str) -> list:
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return [types.TextContent(type="text", text=search_results)]
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@mcp.tool()
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async def get_developer_rules() -> list:
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"""
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Retrieve all developer rules that were generated based on previous interactions.
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This tool queries the Cognee knowledge graph and returns a list of developer
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rules.
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Parameters
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----------
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None
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Returns
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-------
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list
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A list containing a single TextContent object with the retrieved developer rules.
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The format is plain text containing the developer rules in bulletpoints.
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Notes
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-----
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- The specific logic for fetching rules is handled internally.
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- This tool does not accept any parameters and is intended for simple rule inspection use cases.
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"""
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async def fetch_rules_from_cognee() -> str:
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"""Collect all developer rules from Cognee"""
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with redirect_stdout(sys.stderr):
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if cognee_client.use_api:
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logger.warning("Developer rules retrieval is not available in API mode")
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return "Developer rules retrieval is not available in API mode"
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developer_rules = await get_existing_rules(rules_nodeset_name="coding_agent_rules")
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return developer_rules
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rules_text = await fetch_rules_from_cognee()
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return [types.TextContent(type="text", text=rules_text)]
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@mcp.tool()
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async def list_data(dataset_id: str = None) -> list:
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"""
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@ -954,48 +752,6 @@ async def cognify_status():
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return [types.TextContent(type="text", text=error_msg)]
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@mcp.tool()
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async def codify_status():
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"""
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Get the current status of the codify pipeline.
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This function retrieves information about current and recently completed codify operations
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in the codebase dataset. It provides details on progress, success/failure status, and statistics
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about the processed code repositories.
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Returns
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-------
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list
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A list containing a single TextContent object with the status information as a string.
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The status includes information about active and completed jobs for the cognify_code_pipeline.
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Notes
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-----
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- The function retrieves pipeline status specifically for the "cognify_code_pipeline" on the "codebase" dataset
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- Status information includes job progress, execution time, and completion status
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- The status is returned in string format for easy reading
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- This operation is not available in API mode
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"""
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with redirect_stdout(sys.stderr):
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try:
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from cognee.modules.data.methods.get_unique_dataset_id import get_unique_dataset_id
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from cognee.modules.users.methods import get_default_user
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user = await get_default_user()
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status = await cognee_client.get_pipeline_status(
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[await get_unique_dataset_id("codebase", user)], "cognify_code_pipeline"
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)
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return [types.TextContent(type="text", text=str(status))]
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except NotImplementedError:
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error_msg = "❌ Pipeline status is not available in API mode"
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logger.error(error_msg)
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return [types.TextContent(type="text", text=error_msg)]
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except Exception as e:
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error_msg = f"❌ Failed to get codify status: {str(e)}"
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logger.error(error_msg)
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return [types.TextContent(type="text", text=error_msg)]
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def node_to_string(node):
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node_data = ", ".join(
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[f'{key}: "{value}"' for key, value in node.items() if key in ["id", "name"]]
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