kuzu update and test
This commit is contained in:
vasilije
parent
7938ddd444
commit
5cac0e6e07
8 changed files with 124 additions and 91 deletions
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@ -23,7 +23,13 @@ class config:
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graph_config = get_graph_config()
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graph_file_name = graph_config.graph_filename
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graph_config.graph_file_path = os.path.join(databases_directory_path, graph_file_name)
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# For Kuzu v0.11.0+, use single-file database with .kuzu extension
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if graph_config.graph_database_provider.lower() == "kuzu":
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graph_config.graph_file_path = os.path.join(
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databases_directory_path, f"{graph_file_name}.kuzu"
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)
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else:
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graph_config.graph_file_path = os.path.join(databases_directory_path, graph_file_name)
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vector_config = get_vectordb_config()
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if vector_config.vector_db_provider == "lancedb":
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@ -57,7 +57,7 @@ async def set_database_global_context_variables(dataset: Union[str, UUID], user_
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graph_config = {
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"graph_database_provider": "kuzu",
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"graph_file_path": os.path.join(
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cognee_directory_path, dataset_database.graph_database_name
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cognee_directory_path, f"{dataset_database.graph_database_name}.kuzu"
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),
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}
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@ -56,7 +56,11 @@ class GraphConfig(BaseSettings):
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# Set file path based on graph database provider if no file path is provided
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if not values.graph_file_path:
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base = os.path.join(get_absolute_path(".cognee_system"), "databases")
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values.graph_file_path = os.path.join(base, values.graph_filename)
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# For Kuzu v0.11.0+, use single-file database with .kuzu extension
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if provider == "kuzu":
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values.graph_file_path = os.path.join(base, f"{values.graph_filename}.kuzu")
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else:
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values.graph_file_path = os.path.join(base, values.graph_filename)
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return values
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def to_dict(self) -> dict:
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@ -46,7 +46,9 @@ class KuzuAdapter(GraphDBInterface):
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def _initialize_connection(self) -> None:
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"""Initialize the Kuzu database connection and schema."""
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try:
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os.makedirs(self.db_path, exist_ok=True)
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# For Kuzu v0.11.0+, create parent directory but use db_path as file
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parent_dir = os.path.dirname(self.db_path)
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os.makedirs(parent_dir, exist_ok=True)
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self.db = Database(self.db_path)
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self.db.init_database()
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@ -1417,9 +1419,9 @@ class KuzuAdapter(GraphDBInterface):
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async def delete_graph(self) -> None:
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"""
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Delete all data from the graph directory.
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Delete all data from the graph database.
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This method deletes all nodes and relationships from the graph directory
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This method deletes all nodes and relationships from the graph database.
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It raises exceptions for failures occurring during deletion processes.
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"""
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try:
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@ -1432,9 +1434,16 @@ class KuzuAdapter(GraphDBInterface):
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if self.db:
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self.db.close()
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self.db = None
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# For Kuzu v0.11.0+, delete the database file instead of directory
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if os.path.exists(self.db_path):
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shutil.rmtree(self.db_path)
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logger.info(f"Deleted Kuzu database files at {self.db_path}")
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if os.path.isfile(self.db_path):
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os.remove(self.db_path)
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logger.info(f"Deleted Kuzu database file at {self.db_path}")
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else:
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# Fallback for older versions or directory-based databases
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shutil.rmtree(self.db_path)
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logger.info(f"Deleted Kuzu database directory at {self.db_path}")
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except Exception as e:
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logger.error(f"Failed to delete graph data: {e}")
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@ -1454,9 +1463,17 @@ class KuzuAdapter(GraphDBInterface):
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if self.db:
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self.db.close()
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self.db = None
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# For Kuzu v0.11.0+, delete the database file instead of directory
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if os.path.exists(self.db_path):
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shutil.rmtree(self.db_path)
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logger.info(f"Deleted Kuzu database files at {self.db_path}")
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if os.path.isfile(self.db_path):
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os.remove(self.db_path)
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logger.info(f"Deleted Kuzu database file at {self.db_path}")
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else:
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# Fallback for older versions or directory-based databases
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shutil.rmtree(self.db_path)
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logger.info(f"Deleted Kuzu database directory at {self.db_path}")
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# Reinitialize the database
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self._initialize_connection()
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# Verify the database is empty
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@ -96,9 +96,16 @@ async def main():
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from cognee.infrastructure.databases.graph import get_graph_config
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graph_config = get_graph_config()
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assert not os.path.exists(graph_config.graph_file_path) or not os.listdir(
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graph_config.graph_file_path
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), "Kuzu graph directory is not empty"
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# For Kuzu v0.11.0+, check if database file doesn't exist (single-file format with .kuzu extension)
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# For older versions or other providers, check if directory is empty
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if graph_config.graph_database_provider.lower() == "kuzu":
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assert not os.path.exists(graph_config.graph_file_path), (
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"Kuzu graph database file still exists"
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)
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else:
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assert not os.path.exists(graph_config.graph_file_path) or not os.listdir(
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graph_config.graph_file_path
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), "Graph database directory is not empty"
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if __name__ == "__main__":
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78
poetry.lock
generated
78
poetry.lock
generated
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@ -4456,49 +4456,49 @@ files = [
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[[package]]
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name = "kuzu"
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version = "0.10.1"
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version = "0.11.0"
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description = "Highly scalable, extremely fast, easy-to-use embeddable graph database"
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optional = false
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python-versions = "*"
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groups = ["main"]
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files = [
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|
||||
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||||
[[package]]
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||||
|
|
@ -12368,4 +12368,4 @@ weaviate = ["weaviate-client"]
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|||
[metadata]
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||||
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python-versions = ">=3.10,<=3.13"
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@ -59,7 +59,7 @@ dependencies = [
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75
uv.lock
generated
75
uv.lock
generated
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]
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||||
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||||
[[package]]
|
||||
|
|
@ -3857,8 +3856,8 @@ name = "loguru"
|
|||
version = "0.7.3"
|
||||
source = { registry = "https://pypi.org/simple" }
|
||||
dependencies = [
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||||
{ name = "colorama", marker = "sys_platform == 'win32'" },
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{ name = "win32-setctime", marker = "sys_platform == 'win32'" },
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||||
{ name = "colorama", marker = "python_full_version < '3.13' and sys_platform == 'win32'" },
|
||||
{ name = "win32-setctime", marker = "python_full_version < '3.13' and sys_platform == 'win32'" },
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]
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||||
sdist = { url = "https://files.pythonhosted.org/packages/3a/05/a1dae3dffd1116099471c643b8924f5aa6524411dc6c63fdae648c4f1aca/loguru-0.7.3.tar.gz", hash = "sha256:19480589e77d47b8d85b2c827ad95d49bf31b0dcde16593892eb51dd18706eb6", size = 63559 }
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||||
wheels = [
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||||
|
|
|
|||
Loading…
Add table
Reference in a new issue