diff --git a/.github/workflows/upgrade_deps.yml b/.github/workflows/upgrade_deps.yml
index 327ee08cc..5262889de 100644
--- a/.github/workflows/upgrade_deps.yml
+++ b/.github/workflows/upgrade_deps.yml
@@ -34,12 +34,13 @@ jobs:
       pull-requests: write
 
     steps:
-      - uses: actions/checkout@v4
+      - name: Check out
+        uses: actions/checkout@master
 
-      - uses: actions/setup-python@v5
+      - name: Setup Python
+        uses: actions/setup-python@v5
         with:
-          python-version: '3.9'
-          cache: 'poetry'
+          python-version: '3.10'
 
       - name: Install Poetry
         run: |
diff --git a/cognee-mcp/Dockerfile b/cognee-mcp/Dockerfile
index 33b6a86c1..45e601e0f 100644
--- a/cognee-mcp/Dockerfile
+++ b/cognee-mcp/Dockerfile
@@ -7,7 +7,6 @@ ARG DEBUG
 # Set environment variable based on the build argument
 ENV DEBUG=${DEBUG}
 ENV PIP_NO_CACHE_DIR=true
-ENV PATH="${PATH}:/root/.poetry/bin"
 
 WORKDIR /app
 
@@ -17,32 +16,19 @@ ENV UV_COMPILE_BYTECODE=1
 # Copy from the cache instead of linking since it's a mounted volume
 ENV UV_LINK_MODE=copy
 
-# Install the project's dependencies using the lockfile and settings
-RUN --mount=type=cache,target=/root/.cache/uv \
-    --mount=type=bind,source=uv.lock,target=uv.lock \
-    --mount=type=bind,source=pyproject.toml,target=pyproject.toml \
-    uv sync --frozen --no-install-project --no-dev --no-editable
-
-# Then, add the rest of the project source code and install it
-# Installing separately from its dependencies allows optimal layer caching
-ADD . /app
-RUN --mount=type=cache,target=/root/.cache/uv \
-    uv sync --frozen --no-dev --no-editable
-
-RUN apt-get update && apt-get install
+RUN apt-get update && apt-get install -y \
+    gcc \
+    libpq-dev
 
 RUN apt-get install -y \
     gcc \
     libpq-dev
 
-FROM python:3.12-slim-bookworm
+COPY . /app
 
-WORKDIR /app
-
-COPY --from=uv /root/.local /root/.local
-COPY --from=uv --chown=app:app /app/.venv /app/.venv
+RUN uv sync --reinstall
 
 # Place executables in the environment at the front of the path
-ENV PATH="/app/.venv/bin:$PATH"
+ENV PATH="/app/:/app/.venv/bin:$PATH"
 
 ENTRYPOINT ["cognee"]
diff --git a/cognee-mcp/pyproject.toml b/cognee-mcp/pyproject.toml
index c1a7e8539..972b44b05 100644
--- a/cognee-mcp/pyproject.toml
+++ b/cognee-mcp/pyproject.toml
@@ -8,6 +8,7 @@ requires-python = ">=3.10"
 dependencies = [
     "cognee[codegraph,gemini,huggingface]",
     "mcp==1.2.1",
+    "uv>=0.6.3",
 ]
 
 [[project.authors]]
diff --git a/cognee-mcp/src/server.py b/cognee-mcp/src/server.py
index ccea5caca..0842d22fb 100755
--- a/cognee-mcp/src/server.py
+++ b/cognee-mcp/src/server.py
@@ -179,6 +179,7 @@ async def main():
                 raise_exceptions=True,
             )
 
+        logger.info("Cognee MCP server started.")
     except Exception as e:
         logger.error(f"Server failed to start: {str(e)}", exc_info=True)
         raise
diff --git a/cognee-mcp/uv.lock b/cognee-mcp/uv.lock
index 3b14da663..182f35103 100644
--- a/cognee-mcp/uv.lock
+++ b/cognee-mcp/uv.lock
@@ -482,7 +482,7 @@ wheels = [
 
 [[package]]
 name = "cognee"
-version = "0.1.27"
+version = "0.1.29"
 source = { registry = "https://pypi.org/simple" }
 dependencies = [
     { name = "aiofiles" },
@@ -527,9 +527,9 @@ dependencies = [
     { name = "typing-extensions" },
     { name = "uvicorn" },
 ]
-sdist = { url = "https://files.pythonhosted.org/packages/e2/8e/ebc5bce6a628393bb29eec867ec5c5fee46956daa0712a206a778bf44504/cognee-0.1.27.tar.gz", hash = "sha256:500e924fec47baead49f4300dfb41bb8a16df60a7e6fdd36832ebc22d2107abd", size = 349625 }
+sdist = { url = "https://files.pythonhosted.org/packages/35/c6/8f5a73e32a4a95481e13e45d5d748a4399368a1c585455c8900c9aa0f07c/cognee-0.1.29.tar.gz", hash = "sha256:75e91f612b2d0b43c57d294d54560e662ea51c8e64c96aba3d349d722e65e3da", size = 349364 }
 wheels = [
-    { url = "https://files.pythonhosted.org/packages/76/e6/7d2f5efb7eabfe56f9fec7137492540497a8956da98f154ef02beeb2e8a6/cognee-0.1.27-py3-none-any.whl", hash = "sha256:919bd74cbc63f99c5cbb84c17c163912138fa5b516c211a6bf7b1cb5a4cc12dc", size = 518964 },
+    { url = "https://files.pythonhosted.org/packages/5c/8f/62e78c58a5539dbe124fb544b4fa5e3a8cf86d5c44475efbcf8a4dcb3534/cognee-0.1.29-py3-none-any.whl", hash = "sha256:357c3f2eaa29506a328f0a86313117d0f2a1b68856da9b030c3988bb4368b7a8", size = 520759 },
 ]
 
 [package.optional-dependencies]
@@ -552,6 +552,7 @@ source = { editable = "." }
 dependencies = [
     { name = "cognee", extra = ["codegraph", "gemini", "huggingface"] },
     { name = "mcp" },
+    { name = "uv" },
 ]
 
 [package.dev-dependencies]
@@ -563,6 +564,7 @@ dev = [
 requires-dist = [
     { name = "cognee", extras = ["codegraph", "gemini", "huggingface"] },
     { name = "mcp", specifier = "==1.2.1" },
+    { name = "uv", specifier = ">=0.6.3" },
 ]
 
 [package.metadata.requires-dev]
@@ -4073,6 +4075,31 @@ wheels = [
     { url = "https://files.pythonhosted.org/packages/c8/19/4ec628951a74043532ca2cf5d97b7b14863931476d117c471e8e2b1eb39f/urllib3-2.3.0-py3-none-any.whl", hash = "sha256:1cee9ad369867bfdbbb48b7dd50374c0967a0bb7710050facf0dd6911440e3df", size = 128369 },
 ]
 
+[[package]]
+name = "uv"
+version = "0.6.3"
+source = { registry = "https://pypi.org/simple" }
+sdist = { url = "https://files.pythonhosted.org/packages/4e/31/8f354a0b1df7ef4cb42da118dfae046d49f2c57ae427eb948a48a236c37d/uv-0.6.3.tar.gz", hash = "sha256:73587a192f2ebb8a25431d01037fe19f713fa99ff3b9fdf6e7a121131c6c5649", size = 3081857 }
+wheels = [
+    { url = "https://files.pythonhosted.org/packages/bb/c2/5a4138f1c615c7702943ce94155349943b5813e51faa38b6876a2ab86033/uv-0.6.3-py3-none-linux_armv6l.whl", hash = "sha256:facfec798eaddd07615b3a52973e38f2c8862ceb1bc685a5091891cd6c0c2a21", size = 15524019 },
+    { url = "https://files.pythonhosted.org/packages/02/1d/abf01aa5e02b0a066f77b69a4f2f771c2ccd5424cd553e218afb026c65b9/uv-0.6.3-py3-none-macosx_10_12_x86_64.whl", hash = "sha256:b261895497f3c55a8a8917db0a1daeba1a9988ba487b068198d6cc4e8c13e769", size = 15537243 },
+    { url = "https://files.pythonhosted.org/packages/ea/ac/4c1d5e04868051874dce74333fbe98e1f61e40a1522a9258a998775f2fab/uv-0.6.3-py3-none-macosx_11_0_arm64.whl", hash = "sha256:08e3f71a39c76c5b9ab63f9341b433a4ab8a1cc4e29d34ce81bd3b6f5bd642d8", size = 14450283 },
+    { url = "https://files.pythonhosted.org/packages/00/8b/6cdb9a8cb4a5579d8b22d632e98d01f7c3695066ce1a2e33036edba2413a/uv-0.6.3-py3-none-manylinux_2_17_aarch64.manylinux2014_aarch64.musllinux_1_1_aarch64.whl", hash = "sha256:ebd4d1012c5043fe507f1f4477e7a54ec81e939e2a6e0229f23abb242f1622f5", size = 14909401 },
+    { url = "https://files.pythonhosted.org/packages/51/8e/4d8c31250c7440a4c3704e81dab39f7f75db046e8b23f5322c3e47549557/uv-0.6.3-py3-none-manylinux_2_17_armv7l.manylinux2014_armv7l.whl", hash = "sha256:f63b659a5ccbbd8c0ca5200c83ada6d19e73c0f1cafb8f4d9a7ef32544beb06d", size = 15245520 },
+    { url = "https://files.pythonhosted.org/packages/4b/29/52976b3f7a79e4293763823e59d4de3b77506a1b9d298df0285be4879026/uv-0.6.3-py3-none-manylinux_2_17_i686.manylinux2014_i686.whl", hash = "sha256:c23948f242a6bcbd274fa18387a608a52b21a3dfed18d324641964e305c348e9", size = 15890146 },
+    { url = "https://files.pythonhosted.org/packages/54/38/a3c37aaf02b890d908edfec32e7a9b86e0df819df6443837929e40ac8d7e/uv-0.6.3-py3-none-manylinux_2_17_ppc64.manylinux2014_ppc64.whl", hash = "sha256:0445ce49229001cec0a0b1240c6135e2252a3b8017ae878b0559411688a3e12a", size = 16817703 },
+    { url = "https://files.pythonhosted.org/packages/df/0b/cd75c692266eb1cdea6764f9fb14d88babfa8d8433c414ac18623777760d/uv-0.6.3-py3-none-manylinux_2_17_ppc64le.manylinux2014_ppc64le.whl", hash = "sha256:95ab9e9194046f4fb50daec6293e471fc18b6e1d350dba4f5328d0f19f6ec183", size = 16509829 },
+    { url = "https://files.pythonhosted.org/packages/1c/5c/35747d595bf13f5b495a29ec9bb6212fd2fad7d8c32324a7faaeb6a643d0/uv-0.6.3-py3-none-manylinux_2_17_s390x.manylinux2014_s390x.whl", hash = "sha256:af417925d7af00be949ebcab1bf187540bea235e9454aa2193ffae5b7ecc75cf", size = 20477063 },
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+    { url = "https://files.pythonhosted.org/packages/0b/d9/f93e4522cf1de51ff1a985ead75df85523cd1b689128b1b033c9e31204b8/uv-0.6.3-py3-none-win32.whl", hash = "sha256:dc2d965481bba716a0cf9d0f81896a70c341a854f0e4273f1887f22e52e5c9fb", size = 15545377 },
+    { url = "https://files.pythonhosted.org/packages/91/ea/27dd790ec0d1f8c4ced06e27a409522bd157ed295a1140b3fb6cac3cd39a/uv-0.6.3-py3-none-win_amd64.whl", hash = "sha256:8fc19471fd4cfde1b31a47c239591d7c6dc0a31213f206d3953c528f9f3b406c", size = 16860609 },
+    { url = "https://files.pythonhosted.org/packages/97/0f/01e48493264d75cfac6c953809e11c8356c77fb6be32dfce831bcf481ab2/uv-0.6.3-py3-none-win_arm64.whl", hash = "sha256:94a9d59c05f22829388e51a62a9cfddef4000a112e1c561bb5bd5761d4d672f1", size = 15697009 },
+]
+
 [[package]]
 name = "uvicorn"
 version = "0.34.0"
diff --git a/poetry.lock b/poetry.lock
index e6c23fd13..f879282ae 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -508,38 +508,82 @@ files = [
     {file = "backoff-2.2.1.tar.gz", hash = "sha256:03f829f5bb1923180821643f8753b0502c3b682293992485b0eef2807afa5cba"},
 ]
 
+[[package]]
+name = "backrefs"
+version = "5.8"
+description = "A wrapper around re and regex that adds additional back references."
+optional = false
+python-versions = ">=3.9"
+files = [
+    {file = "backrefs-5.8-py310-none-any.whl", hash = "sha256:c67f6638a34a5b8730812f5101376f9d41dc38c43f1fdc35cb54700f6ed4465d"},
+    {file = "backrefs-5.8-py311-none-any.whl", hash = "sha256:2e1c15e4af0e12e45c8701bd5da0902d326b2e200cafcd25e49d9f06d44bb61b"},
+    {file = "backrefs-5.8-py312-none-any.whl", hash = "sha256:bbef7169a33811080d67cdf1538c8289f76f0942ff971222a16034da88a73486"},
+    {file = "backrefs-5.8-py313-none-any.whl", hash = "sha256:e3a63b073867dbefd0536425f43db618578528e3896fb77be7141328642a1585"},
+    {file = "backrefs-5.8-py39-none-any.whl", hash = "sha256:a66851e4533fb5b371aa0628e1fee1af05135616b86140c9d787a2ffdf4b8fdc"},
+    {file = "backrefs-5.8.tar.gz", hash = "sha256:2cab642a205ce966af3dd4b38ee36009b31fa9502a35fd61d59ccc116e40a6bd"},
+]
+
+[package.extras]
+extras = ["regex"]
+
 [[package]]
 name = "bcrypt"
-version = "4.2.1"
+version = "4.3.0"
 description = "Modern password hashing for your software and your servers"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
-    {file = "bcrypt-4.2.1-cp37-abi3-macosx_10_12_universal2.whl", hash = "sha256:1340411a0894b7d3ef562fb233e4b6ed58add185228650942bdc885362f32c17"},
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 ]
 
 [package.extras]
@@ -610,17 +654,17 @@ xyzservices = ">=2021.09.1"
 
 [[package]]
 name = "boto3"
-version = "1.37.2"
+version = "1.37.4"
 description = "The AWS SDK for Python"
 optional = false
 python-versions = ">=3.8"
 files = [
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 [package.dependencies]
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+botocore = ">=1.37.4,<1.38.0"
 jmespath = ">=0.7.1,<2.0.0"
 s3transfer = ">=0.11.0,<0.12.0"
 
@@ -629,13 +673,13 @@ crt = ["botocore[crt] (>=1.21.0,<2.0a0)"]
 
 [[package]]
 name = "botocore"
-version = "1.37.2"
+version = "1.37.4"
 description = "Low-level, data-driven core of boto 3."
 optional = false
 python-versions = ">=3.8"
 files = [
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 ]
 
 [package.dependencies]
@@ -1079,42 +1123,46 @@ toml = ["tomli"]
 
 [[package]]
 name = "cryptography"
-version = "44.0.1"
+version = "44.0.2"
 description = "cryptography is a package which provides cryptographic recipes and primitives to Python developers."
 optional = false
 python-versions = "!=3.9.0,!=3.9.1,>=3.7"
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 test-randomorder = ["pytest-randomly"]
 
 [[package]]
@@ -2285,13 +2333,13 @@ umap-learn = ["dirty-cat (==0.2.0)", "scikit-learn (>=1.0)", "umap-learn"]
 
 [[package]]
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 [package.dependencies]
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 [[package]]
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 [package.dependencies]
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 [[package]]
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 [[package]]
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 [package.dependencies]
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 jinja2 = ">=3.0,<4.0"
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 [package.extras]
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+version = "0.9.9"
 description = "An extremely fast Python linter and code formatter, written in Rust."
 optional = false
 python-versions = ">=3.7"
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 ]
 
 [[package]]
@@ -8915,13 +8969,13 @@ test = ["vcrpy (>=1.10.3)"]
 
 [[package]]
 name = "typer"
-version = "0.15.1"
+version = "0.15.2"
 description = "Typer, build great CLIs. Easy to code. Based on Python type hints."
 optional = false
 python-versions = ">=3.7"
 files = [
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 ]
 
 [package.dependencies]
@@ -8943,13 +8997,13 @@ files = [
 
 [[package]]
 name = "types-setuptools"
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+version = "75.8.2.20250301"
 description = "Typing stubs for setuptools"
 optional = false
 python-versions = ">=3.9"
 files = [
-    {file = "types_setuptools-75.8.0.20250225-py3-none-any.whl", hash = "sha256:94c86b439cc60bcc68c1cda3fd2c301f007f8f9502f4fbb54c66cb5ce9b875af"},
-    {file = "types_setuptools-75.8.0.20250225.tar.gz", hash = "sha256:6038f7e983d55792a5f90d8fdbf5d4c186026214a16bb65dd6ae83c624ae9636"},
+    {file = "types_setuptools-75.8.2.20250301-py3-none-any.whl", hash = "sha256:3cc3e751db9e84eddf1e6d4f8c46bef2c77e6c25b0cd096f729ffa57d3d6a83a"},
+    {file = "types_setuptools-75.8.2.20250301.tar.gz", hash = "sha256:c900bceebfffc92a4abc3cfd4b3c39ead1a2298a73dae37e6bc09da7baf797a0"},
 ]
 
 [[package]]
@@ -9792,7 +9846,7 @@ test = ["big-O", "importlib-resources", "jaraco.functools", "jaraco.itertools",
 type = ["pytest-mypy"]
 
 [extras]
-codegraph = ["fastembed", "tree-sitter", "tree-sitter-python"]
+codegraph = ["fastembed", "transformers", "tree-sitter", "tree-sitter-python"]
 deepeval = ["deepeval"]
 docs = ["unstructured"]
 evals = ["gdown", "plotly"]
@@ -9818,4 +9872,4 @@ weaviate = ["weaviate-client"]
 [metadata]
 lock-version = "2.0"
 python-versions = ">=3.10.0,<3.13"
-content-hash = "c2be14041f367647dbdd2199b8ae8ec7ad6c346513fe51bd8b13e1e678f8d786"
+content-hash = "6dd08e77896a1bc34f0b451309df0ca64c31058b504e01b8f890598e568c7d3d"
diff --git a/pyproject.toml b/pyproject.toml
index b2ad41ceb..02d81e29f 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -108,7 +108,7 @@ falkordb = ["falkordb"]
 groq = ["groq"]
 milvus = ["pymilvus"]
 docs = ["unstructured"]
-codegraph = ["fastembed", "tree-sitter", "tree-sitter-python"]
+codegraph = ["fastembed", "transformers", "tree-sitter", "tree-sitter-python"]
 evals = ["plotly", "gdown"]
 gui = ["pyside6", "qasync"]
 graphiti = ["graphiti-core"]