LightRAG/lightrag/kg/json_doc_status_impl.py
clssck 69358d830d test(lightrag,examples,api): comprehensive ruff formatting and type hints
Format entire codebase with ruff and add type hints across all modules:
- Apply ruff formatting to all Python files (121 files, 17K insertions)
- Add type hints to function signatures throughout lightrag core and API
- Update test suite with improved type annotations and docstrings
- Add pyrightconfig.json for static type checking configuration
- Create prompt_optimized.py and test_extraction_prompt_ab.py test files
- Update ruff.toml and .gitignore for improved linting configuration
- Standardize code style across examples, reproduce scripts, and utilities
2025-12-05 15:17:06 +01:00

377 lines
15 KiB
Python

import os
from dataclasses import dataclass
from typing import Any, final
from lightrag.base import (
DocProcessingStatus,
DocStatus,
DocStatusStorage,
)
from lightrag.exceptions import StorageNotInitializedError
from lightrag.utils import (
get_pinyin_sort_key,
load_json,
logger,
write_json,
)
from .shared_storage import (
clear_all_update_flags,
get_data_init_lock,
get_namespace_data,
get_namespace_lock,
get_update_flag,
set_all_update_flags,
try_initialize_namespace,
)
@final
@dataclass
class JsonDocStatusStorage(DocStatusStorage):
"""JSON implementation of document status storage"""
def __post_init__(self):
working_dir = self.global_config['working_dir']
if self.workspace:
# Include workspace in the file path for data isolation
workspace_dir = os.path.join(working_dir, self.workspace)
else:
# Default behavior when workspace is empty
workspace_dir = working_dir
self.workspace = ''
os.makedirs(workspace_dir, exist_ok=True)
self._file_name = os.path.join(workspace_dir, f'kv_store_{self.namespace}.json')
self._data = None
self._storage_lock = None
self.storage_updated = None
async def initialize(self):
"""Initialize storage data"""
self._storage_lock = get_namespace_lock(self.namespace, workspace=self.workspace)
self.storage_updated = await get_update_flag(self.namespace, workspace=self.workspace)
async with get_data_init_lock():
# check need_init must before get_namespace_data
need_init = await try_initialize_namespace(self.namespace, workspace=self.workspace)
self._data = await get_namespace_data(self.namespace, workspace=self.workspace)
if need_init:
loaded_data = load_json(self._file_name) or {}
async with self._storage_lock:
self._data.update(loaded_data)
logger.info(
f'[{self.workspace}] Process {os.getpid()} doc status load {self.namespace} with {len(loaded_data)} records'
)
async def filter_keys(self, keys: set[str]) -> set[str]:
"""Return keys that should be processed (not in storage or not successfully processed)"""
if self._storage_lock is None:
raise StorageNotInitializedError('JsonDocStatusStorage')
async with self._storage_lock:
return set(keys) - set(self._data.keys())
async def get_by_ids(self, ids: list[str]) -> list[dict[str, Any]]:
ordered_results: list[dict[str, Any] | None] = []
if self._storage_lock is None:
raise StorageNotInitializedError('JsonDocStatusStorage')
async with self._storage_lock:
for id in ids:
data = self._data.get(id, None)
if data:
ordered_results.append(data.copy())
else:
ordered_results.append(None)
return ordered_results
async def get_status_counts(self) -> dict[str, int]:
"""Get counts of documents in each status"""
counts = {status.value: 0 for status in DocStatus}
if self._storage_lock is None:
raise StorageNotInitializedError('JsonDocStatusStorage')
async with self._storage_lock:
for doc in self._data.values():
counts[doc['status']] += 1
return counts
async def get_docs_by_status(self, status: DocStatus) -> dict[str, DocProcessingStatus]:
"""Get all documents with a specific status"""
result = {}
async with self._storage_lock:
for k, v in self._data.items():
if v['status'] == status.value:
try:
# Make a copy of the data to avoid modifying the original
data = v.copy()
# Remove deprecated content field if it exists
data.pop('content', None)
# If file_path is not in data, use document id as file path
if 'file_path' not in data:
data['file_path'] = 'no-file-path'
# Ensure new fields exist with default values
if 'metadata' not in data:
data['metadata'] = {}
if 'error_msg' not in data:
data['error_msg'] = None
result[k] = DocProcessingStatus(**data)
except KeyError as e:
logger.error(f'[{self.workspace}] Missing required field for document {k}: {e}')
continue
return result
async def get_docs_by_track_id(self, track_id: str) -> dict[str, DocProcessingStatus]:
"""Get all documents with a specific track_id"""
result = {}
async with self._storage_lock:
for k, v in self._data.items():
if v.get('track_id') == track_id:
try:
# Make a copy of the data to avoid modifying the original
data = v.copy()
# Remove deprecated content field if it exists
data.pop('content', None)
# If file_path is not in data, use document id as file path
if 'file_path' not in data:
data['file_path'] = 'no-file-path'
# Ensure new fields exist with default values
if 'metadata' not in data:
data['metadata'] = {}
if 'error_msg' not in data:
data['error_msg'] = None
result[k] = DocProcessingStatus(**data)
except KeyError as e:
logger.error(f'[{self.workspace}] Missing required field for document {k}: {e}')
continue
return result
async def index_done_callback(self) -> None:
async with self._storage_lock:
if self.storage_updated.value:
data_dict = dict(self._data) if hasattr(self._data, '_getvalue') else self._data
logger.debug(
f'[{self.workspace}] Process {os.getpid()} doc status writting {len(data_dict)} records to {self.namespace}'
)
# Write JSON and check if sanitization was applied
needs_reload = write_json(data_dict, self._file_name)
# If data was sanitized, reload cleaned data to update shared memory
if needs_reload:
logger.info(f'[{self.workspace}] Reloading sanitized data into shared memory for {self.namespace}')
cleaned_data = load_json(self._file_name)
if cleaned_data is not None:
self._data.clear()
self._data.update(cleaned_data)
await clear_all_update_flags(self.namespace, workspace=self.workspace)
async def upsert(self, data: dict[str, dict[str, Any]]) -> None:
"""
Importance notes for in-memory storage:
1. Changes will be persisted to disk during the next index_done_callback
2. update flags to notify other processes that data persistence is needed
"""
if not data:
return
logger.debug(f'[{self.workspace}] Inserting {len(data)} records to {self.namespace}')
if self._storage_lock is None:
raise StorageNotInitializedError('JsonDocStatusStorage')
async with self._storage_lock:
# Ensure chunks_list field exists for new documents
for _doc_id, doc_data in data.items():
if 'chunks_list' not in doc_data:
doc_data['chunks_list'] = []
self._data.update(data)
await set_all_update_flags(self.namespace, workspace=self.workspace)
await self.index_done_callback()
async def is_empty(self) -> bool:
"""Check if the storage is empty
Returns:
bool: True if storage is empty, False otherwise
Raises:
StorageNotInitializedError: If storage is not initialized
"""
if self._storage_lock is None:
raise StorageNotInitializedError('JsonDocStatusStorage')
async with self._storage_lock:
return len(self._data) == 0
async def get_by_id(self, id: str) -> dict[str, Any] | None:
async with self._storage_lock:
return self._data.get(id)
async def get_docs_paginated(
self,
status_filter: DocStatus | None = None,
page: int = 1,
page_size: int = 50,
sort_field: str = 'updated_at',
sort_direction: str = 'desc',
) -> tuple[list[tuple[str, DocProcessingStatus]], int]:
"""Get documents with pagination support
Args:
status_filter: Filter by document status, None for all statuses
page: Page number (1-based)
page_size: Number of documents per page (10-200)
sort_field: Field to sort by ('created_at', 'updated_at', 'id')
sort_direction: Sort direction ('asc' or 'desc')
Returns:
Tuple of (list of (doc_id, DocProcessingStatus) tuples, total_count)
"""
# Validate parameters
if page < 1:
page = 1
if page_size < 10:
page_size = 10
elif page_size > 200:
page_size = 200
if sort_field not in ['created_at', 'updated_at', 'id', 'file_path']:
sort_field = 'updated_at'
if sort_direction.lower() not in ['asc', 'desc']:
sort_direction = 'desc'
# For JSON storage, we load all data and sort/filter in memory
all_docs = []
async with self._storage_lock:
for doc_id, doc_data in self._data.items():
# Apply status filter
if status_filter is not None and doc_data.get('status') != status_filter.value:
continue
try:
# Prepare document data
data = doc_data.copy()
data.pop('content', None)
if 'file_path' not in data:
data['file_path'] = 'no-file-path'
if 'metadata' not in data:
data['metadata'] = {}
if 'error_msg' not in data:
data['error_msg'] = None
doc_status = DocProcessingStatus(**data)
# Add sort key for sorting
if sort_field == 'id':
doc_status._sort_key = doc_id
elif sort_field == 'file_path':
# Use pinyin sorting for file_path field to support Chinese characters
file_path_value = getattr(doc_status, sort_field, '')
doc_status._sort_key = get_pinyin_sort_key(file_path_value)
else:
doc_status._sort_key = getattr(doc_status, sort_field, '')
all_docs.append((doc_id, doc_status))
except KeyError as e:
logger.error(f'[{self.workspace}] Error processing document {doc_id}: {e}')
continue
# Sort documents
reverse_sort = sort_direction.lower() == 'desc'
all_docs.sort(key=lambda x: getattr(x[1], '_sort_key', ''), reverse=reverse_sort)
# Remove sort key from documents
for _doc_id, doc in all_docs:
if hasattr(doc, '_sort_key'):
delattr(doc, '_sort_key')
total_count = len(all_docs)
# Apply pagination
start_idx = (page - 1) * page_size
end_idx = start_idx + page_size
paginated_docs = all_docs[start_idx:end_idx]
return paginated_docs, total_count
async def get_all_status_counts(self) -> dict[str, int]:
"""Get counts of documents in each status for all documents
Returns:
Dictionary mapping status names to counts, including 'all' field
"""
counts = await self.get_status_counts()
# Add 'all' field with total count
total_count = sum(counts.values())
counts['all'] = total_count
return counts
async def delete(self, doc_ids: list[str]) -> None:
"""Delete specific records from storage by their IDs
Importance notes for in-memory storage:
1. Changes will be persisted to disk during the next index_done_callback
2. update flags to notify other processes that data persistence is needed
Args:
ids (list[str]): List of document IDs to be deleted from storage
Returns:
None
"""
async with self._storage_lock:
any_deleted = False
for doc_id in doc_ids:
result = self._data.pop(doc_id, None)
if result is not None:
any_deleted = True
if any_deleted:
await set_all_update_flags(self.namespace, workspace=self.workspace)
async def get_doc_by_file_path(self, file_path: str) -> dict[str, Any] | None:
"""Get document by file path
Args:
file_path: The file path to search for
Returns:
Union[dict[str, Any], None]: Document data if found, None otherwise
Returns the same format as get_by_ids method
"""
if self._storage_lock is None:
raise StorageNotInitializedError('JsonDocStatusStorage')
async with self._storage_lock:
for _doc_id, doc_data in self._data.items():
if doc_data.get('file_path') == file_path:
# Return complete document data, consistent with get_by_ids method
return doc_data
return None
async def drop(self) -> dict[str, str]:
"""Drop all document status data from storage and clean up resources
This method will:
1. Clear all document status data from memory
2. Update flags to notify other processes
3. Trigger index_done_callback to save the empty state
Returns:
dict[str, str]: Operation status and message
- On success: {"status": "success", "message": "data dropped"}
- On failure: {"status": "error", "message": "<error details>"}
"""
try:
async with self._storage_lock:
self._data.clear()
await set_all_update_flags(self.namespace, workspace=self.workspace)
await self.index_done_callback()
logger.info(f'[{self.workspace}] Process {os.getpid()} drop {self.namespace}')
return {'status': 'success', 'message': 'data dropped'}
except Exception as e:
logger.error(f'[{self.workspace}] Error dropping {self.namespace}: {e}')
return {'status': 'error', 'message': str(e)}