LightRAG/lightrag/utils.py

from __future__ import annotations
import weakref

import sys

import asyncio
import html
import csv
import json
import logging
import logging.handlers
import os
import re
import time
import uuid
from dataclasses import dataclass
from datetime import datetime
from functools import wraps
from hashlib import md5
from typing import (
    Any,
    Protocol,
    Callable,
    TYPE_CHECKING,
    List,
    Optional,
    Iterable,
    Sequence,
    Collection,
)
import numpy as np
from dotenv import load_dotenv

from lightrag.constants import (
    DEFAULT_LOG_MAX_BYTES,
    DEFAULT_LOG_BACKUP_COUNT,
    DEFAULT_LOG_FILENAME,
    GRAPH_FIELD_SEP,
    DEFAULT_MAX_TOTAL_TOKENS,
    DEFAULT_SOURCE_IDS_LIMIT_METHOD,
    VALID_SOURCE_IDS_LIMIT_METHODS,
    SOURCE_IDS_LIMIT_METHOD_FIFO,
)

# Precompile regex pattern for JSON sanitization (module-level, compiled once)
_SURROGATE_PATTERN = re.compile(r"[\uD800-\uDFFF\uFFFE\uFFFF]")


class SafeStreamHandler(logging.StreamHandler):
    """StreamHandler that gracefully handles closed streams during shutdown.

    This handler prevents "ValueError: I/O operation on closed file" errors
    that can occur when pytest or other test frameworks close stdout/stderr
    before Python's logging cleanup runs.
    """

    def flush(self):
        """Flush the stream, ignoring errors if the stream is closed."""
        try:
            super().flush()
        except (ValueError, OSError):
            # Stream is closed or otherwise unavailable, silently ignore
            pass

    def close(self):
        """Close the handler, ignoring errors if the stream is already closed."""
        try:
            super().close()
        except (ValueError, OSError):
            # Stream is closed or otherwise unavailable, silently ignore
            pass


# Initialize logger with basic configuration
logger = logging.getLogger("lightrag")
logger.propagate = False  # prevent log message send to root logger
logger.setLevel(logging.INFO)

# Add console handler if no handlers exist
if not logger.handlers:
    console_handler = SafeStreamHandler()
    console_handler.setLevel(logging.INFO)
    formatter = logging.Formatter("%(levelname)s: %(message)s")
    console_handler.setFormatter(formatter)
    logger.addHandler(console_handler)

# Set httpx logging level to WARNING
logging.getLogger("httpx").setLevel(logging.WARNING)


def _patch_ascii_colors_console_handler() -> None:
    """Prevent ascii_colors from printing flush errors during interpreter exit."""

    try:
        from ascii_colors import ConsoleHandler
    except ImportError:
        return

    if getattr(ConsoleHandler, "_lightrag_patched", False):
        return

    original_handle_error = ConsoleHandler.handle_error

    def _safe_handle_error(self, message: str) -> None:  # type: ignore[override]
        exc_type, _, _ = sys.exc_info()
        if exc_type in (ValueError, OSError) and "close" in message.lower():
            return
        original_handle_error(self, message)

    ConsoleHandler.handle_error = _safe_handle_error  # type: ignore[assignment]
    ConsoleHandler._lightrag_patched = True  # type: ignore[attr-defined]


_patch_ascii_colors_console_handler()


# Global import for pypinyin with startup-time logging
try:
    import pypinyin

    _PYPINYIN_AVAILABLE = True
    # logger.info("pypinyin loaded successfully for Chinese pinyin sorting")
except ImportError:
    pypinyin = None
    _PYPINYIN_AVAILABLE = False
    logger.warning(
        "pypinyin is not installed. Chinese pinyin sorting will use simple string sorting."
    )


async def safe_vdb_operation_with_exception(
    operation: Callable,
    operation_name: str,
    entity_name: str = "",
    max_retries: int = 3,
    retry_delay: float = 0.2,
    logger_func: Optional[Callable] = None,
) -> None:
    """
    Safely execute vector database operations with retry mechanism and exception handling.

    This function ensures that VDB operations are executed with proper error handling
    and retry logic. If all retries fail, it raises an exception to maintain data consistency.

    Args:
        operation: The async operation to execute
        operation_name: Operation name for logging purposes
        entity_name: Entity name for logging purposes
        max_retries: Maximum number of retry attempts
        retry_delay: Delay between retries in seconds
        logger_func: Logger function to use for error messages

    Raises:
        Exception: When operation fails after all retry attempts
    """
    log_func = logger_func or logger.warning

    for attempt in range(max_retries):
        try:
            await operation()
            return  # Success, return immediately
        except Exception as e:
            if attempt >= max_retries - 1:
                error_msg = f"VDB {operation_name} failed for {entity_name} after {max_retries} attempts: {e}"
                log_func(error_msg)
                raise Exception(error_msg) from e
            else:
                log_func(
                    f"VDB {operation_name} attempt {attempt + 1} failed for {entity_name}: {e}, retrying..."
                )
                if retry_delay > 0:
                    await asyncio.sleep(retry_delay)


def get_env_value(
    env_key: str, default: any, value_type: type = str, special_none: bool = False
) -> any:
    """
    Get value from environment variable with type conversion

    Args:
        env_key (str): Environment variable key
        default (any): Default value if env variable is not set
        value_type (type): Type to convert the value to
        special_none (bool): If True, return None when value is "None"

    Returns:
        any: Converted value from environment or default
    """
    value = os.getenv(env_key)
    if value is None:
        return default

    # Handle special case for "None" string
    if special_none and value == "None":
        return None

    if value_type is bool:
        return value.lower() in ("true", "1", "yes", "t", "on")

    # Handle list type with JSON parsing
    if value_type is list:
        try:
            import json

            parsed_value = json.loads(value)
            # Ensure the parsed value is actually a list
            if isinstance(parsed_value, list):
                return parsed_value
            else:
                logger.warning(
                    f"Environment variable {env_key} is not a valid JSON list, using default"
                )
                return default
        except (json.JSONDecodeError, ValueError) as e:
            logger.warning(
                f"Failed to parse {env_key} as JSON list: {e}, using default"
            )
            return default

    try:
        return value_type(value)
    except (ValueError, TypeError):
        return default


# Use TYPE_CHECKING to avoid circular imports
if TYPE_CHECKING:
    from lightrag.base import BaseKVStorage, BaseVectorStorage, QueryParam

# use the .env that is inside the current folder
# allows to use different .env file for each lightrag instance
# the OS environment variables take precedence over the .env file
load_dotenv(dotenv_path=".env", override=False)

VERBOSE_DEBUG = os.getenv("VERBOSE", "false").lower() == "true"


def verbose_debug(msg: str, *args, **kwargs):
    """Function for outputting detailed debug information.
    When VERBOSE_DEBUG=True, outputs the complete message.
    When VERBOSE_DEBUG=False, outputs only the first 50 characters.

    Args:
        msg: The message format string
        *args: Arguments to be formatted into the message
        **kwargs: Keyword arguments passed to logger.debug()
    """
    if VERBOSE_DEBUG:
        logger.debug(msg, *args, **kwargs)
    else:
        # Format the message with args first
        if args:
            formatted_msg = msg % args
        else:
            formatted_msg = msg
        # Then truncate the formatted message
        truncated_msg = (
            formatted_msg[:150] + "..." if len(formatted_msg) > 150 else formatted_msg
        )
        # Remove consecutive newlines
        truncated_msg = re.sub(r"\n+", "\n", truncated_msg)
        logger.debug(truncated_msg, **kwargs)


def set_verbose_debug(enabled: bool):
    """Enable or disable verbose debug output"""
    global VERBOSE_DEBUG
    VERBOSE_DEBUG = enabled


statistic_data = {"llm_call": 0, "llm_cache": 0, "embed_call": 0}


class LightragPathFilter(logging.Filter):
    """Filter for lightrag logger to filter out frequent path access logs"""

    def __init__(self):
        super().__init__()
        # Define paths to be filtered
        self.filtered_paths = [
            "/documents",
            "/documents/paginated",
            "/health",
            "/webui/",
            "/documents/pipeline_status",
        ]
        # self.filtered_paths = ["/health", "/webui/"]

    def filter(self, record):
        try:
            # Check if record has the required attributes for an access log
            if not hasattr(record, "args") or not isinstance(record.args, tuple):
                return True
            if len(record.args) < 5:
                return True

            # Extract method, path and status from the record args
            method = record.args[1]
            path = record.args[2]
            status = record.args[4]

            # Filter out successful GET/POST requests to filtered paths
            if (
                (method == "GET" or method == "POST")
                and (status == 200 or status == 304)
                and path in self.filtered_paths
            ):
                return False

            return True
        except Exception:
            # In case of any error, let the message through
            return True


def setup_logger(
    logger_name: str,
    level: str = "INFO",
    add_filter: bool = False,
    log_file_path: str | None = None,
    enable_file_logging: bool = True,
):
    """Set up a logger with console and optionally file handlers

    Args:
        logger_name: Name of the logger to set up
        level: Log level (DEBUG, INFO, WARNING, ERROR, CRITICAL)
        add_filter: Whether to add LightragPathFilter to the logger
        log_file_path: Path to the log file. If None and file logging is enabled, defaults to lightrag.log in LOG_DIR or cwd
        enable_file_logging: Whether to enable logging to a file (defaults to True)
    """
    # Configure formatters
    detailed_formatter = logging.Formatter(
        "%(asctime)s - %(name)s - %(levelname)s - %(message)s"
    )
    simple_formatter = logging.Formatter("%(levelname)s: %(message)s")

    logger_instance = logging.getLogger(logger_name)
    logger_instance.setLevel(level)
    logger_instance.handlers = []  # Clear existing handlers
    logger_instance.propagate = False

    # Add console handler with safe stream handling
    console_handler = SafeStreamHandler()
    console_handler.setFormatter(simple_formatter)
    console_handler.setLevel(level)
    logger_instance.addHandler(console_handler)

    # Add file handler by default unless explicitly disabled
    if enable_file_logging:
        # Get log file path
        if log_file_path is None:
            log_dir = os.getenv("LOG_DIR", os.getcwd())
            log_file_path = os.path.abspath(os.path.join(log_dir, DEFAULT_LOG_FILENAME))

        # Ensure log directory exists
        os.makedirs(os.path.dirname(log_file_path), exist_ok=True)

        # Get log file max size and backup count from environment variables
        log_max_bytes = get_env_value("LOG_MAX_BYTES", DEFAULT_LOG_MAX_BYTES, int)
        log_backup_count = get_env_value(
            "LOG_BACKUP_COUNT", DEFAULT_LOG_BACKUP_COUNT, int
        )

        try:
            # Add file handler
            file_handler = logging.handlers.RotatingFileHandler(
                filename=log_file_path,
                maxBytes=log_max_bytes,
                backupCount=log_backup_count,
                encoding="utf-8",
            )
            file_handler.setFormatter(detailed_formatter)
            file_handler.setLevel(level)
            logger_instance.addHandler(file_handler)
        except PermissionError as e:
            logger.warning(f"Could not create log file at {log_file_path}: {str(e)}")
            logger.warning("Continuing with console logging only")

    # Add path filter if requested
    if add_filter:
        path_filter = LightragPathFilter()
        logger_instance.addFilter(path_filter)


class UnlimitedSemaphore:
    """A context manager that allows unlimited access."""

    async def __aenter__(self):
        pass

    async def __aexit__(self, exc_type, exc, tb):
        pass


@dataclass
class TaskState:
    """Task state tracking for priority queue management"""

    future: asyncio.Future
    start_time: float
    execution_start_time: float = None
    worker_started: bool = False
    cancellation_requested: bool = False
    cleanup_done: bool = False


@dataclass
class EmbeddingFunc:
    """Embedding function wrapper with dimension validation
    This class wraps an embedding function to ensure that the output embeddings have the correct dimension.
    This class should not be wrapped multiple times.

    Args:
        embedding_dim: Expected dimension of the embeddings
        func: The actual embedding function to wrap
        max_token_size: Optional token limit for the embedding model
        send_dimensions: Whether to inject embedding_dim as a keyword argument
    """

    embedding_dim: int
    func: callable
    max_token_size: int | None = None  # Token limit for the embedding model
    send_dimensions: bool = (
        False  # Control whether to send embedding_dim to the function
    )

    async def __call__(self, *args, **kwargs) -> np.ndarray:
        # Only inject embedding_dim when send_dimensions is True
        if self.send_dimensions:
            # Check if user provided embedding_dim parameter
            if "embedding_dim" in kwargs:
                user_provided_dim = kwargs["embedding_dim"]
                # If user's value differs from class attribute, output warning
                if (
                    user_provided_dim is not None
                    and user_provided_dim != self.embedding_dim
                ):
                    logger.warning(
                        f"Ignoring user-provided embedding_dim={user_provided_dim}, "
                        f"using declared embedding_dim={self.embedding_dim} from decorator"
                    )

            # Inject embedding_dim from decorator
            kwargs["embedding_dim"] = self.embedding_dim

        # Call the actual embedding function
        result = await self.func(*args, **kwargs)

        # Validate embedding dimensions using total element count
        total_elements = result.size  # Total number of elements in the numpy array
        expected_dim = self.embedding_dim

        # Check if total elements can be evenly divided by embedding_dim
        if total_elements % expected_dim != 0:
            raise ValueError(
                f"Embedding dimension mismatch detected: "
                f"total elements ({total_elements}) cannot be evenly divided by "
                f"expected dimension ({expected_dim}). "
            )

        # Optional: Verify vector count matches input text count
        actual_vectors = total_elements // expected_dim
        if args and isinstance(args[0], (list, tuple)):
            expected_vectors = len(args[0])
            if actual_vectors != expected_vectors:
                raise ValueError(
                    f"Vector count mismatch: "
                    f"expected {expected_vectors} vectors but got {actual_vectors} vectors (from embedding result)."
                )

        return result


def compute_args_hash(*args: Any) -> str:
    """Compute a hash for the given arguments with safe Unicode handling.

    Args:
        *args: Arguments to hash
    Returns:
        str: Hash string
    """
    # Convert all arguments to strings and join them
    args_str = "".join([str(arg) for arg in args])

    # Use 'replace' error handling to safely encode problematic Unicode characters
    # This replaces invalid characters with Unicode replacement character (U+FFFD)
    try:
        return md5(args_str.encode("utf-8")).hexdigest()
    except UnicodeEncodeError:
        # Handle surrogate characters and other encoding issues
        safe_bytes = args_str.encode("utf-8", errors="replace")
        return md5(safe_bytes).hexdigest()


def compute_mdhash_id(content: str, prefix: str = "") -> str:
    """
    Compute a unique ID for a given content string.

    The ID is a combination of the given prefix and the MD5 hash of the content string.
    """
    return prefix + compute_args_hash(content)


def generate_cache_key(mode: str, cache_type: str, hash_value: str) -> str:
    """Generate a flattened cache key in the format {mode}:{cache_type}:{hash}

    Args:
        mode: Cache mode (e.g., 'default', 'local', 'global')
        cache_type: Type of cache (e.g., 'extract', 'query', 'keywords')
        hash_value: Hash value from compute_args_hash

    Returns:
        str: Flattened cache key
    """
    return f"{mode}:{cache_type}:{hash_value}"


def parse_cache_key(cache_key: str) -> tuple[str, str, str] | None:
    """Parse a flattened cache key back into its components

    Args:
        cache_key: Flattened cache key in format {mode}:{cache_type}:{hash}

    Returns:
        tuple[str, str, str] | None: (mode, cache_type, hash) or None if invalid format
    """
    parts = cache_key.split(":", 2)
    if len(parts) == 3:
        return parts[0], parts[1], parts[2]
    return None


# Custom exception classes
class QueueFullError(Exception):
    """Raised when the queue is full and the wait times out"""

    pass


class WorkerTimeoutError(Exception):
    """Worker-level timeout exception with specific timeout information"""

    def __init__(self, timeout_value: float, timeout_type: str = "execution"):
        self.timeout_value = timeout_value
        self.timeout_type = timeout_type
        super().__init__(f"Worker {timeout_type} timeout after {timeout_value}s")


class HealthCheckTimeoutError(Exception):
    """Health Check-level timeout exception"""

    def __init__(self, timeout_value: float, execution_duration: float):
        self.timeout_value = timeout_value
        self.execution_duration = execution_duration
        super().__init__(
            f"Task forcefully terminated due to execution timeout (>{timeout_value}s, actual: {execution_duration:.1f}s)"
        )


def priority_limit_async_func_call(
    max_size: int,
    llm_timeout: float = None,
    max_execution_timeout: float = None,
    max_task_duration: float = None,
    max_queue_size: int = 1000,
    cleanup_timeout: float = 2.0,
    queue_name: str = "limit_async",
):
    """
    Enhanced priority-limited asynchronous function call decorator with robust timeout handling

    This decorator provides a comprehensive solution for managing concurrent LLM requests with:
    - Multi-layer timeout protection (LLM -> Worker -> Health Check -> User)
    - Task state tracking to prevent race conditions
    - Enhanced health check system with stuck task detection
    - Proper resource cleanup and error recovery

    Args:
        max_size: Maximum number of concurrent calls
        max_queue_size: Maximum queue capacity to prevent memory overflow
        llm_timeout: LLM provider timeout (from global config), used to calculate other timeouts
        max_execution_timeout: Maximum time for worker to execute function (defaults to llm_timeout + 30s)
        max_task_duration: Maximum time before health check intervenes (defaults to llm_timeout + 60s)
        cleanup_timeout: Maximum time to wait for cleanup operations (defaults to 2.0s)
        queue_name: Optional queue name for logging identification (defaults to "limit_async")

    Returns:
        Decorator function
    """

    def final_decro(func):
        # Ensure func is callable
        if not callable(func):
            raise TypeError(f"Expected a callable object, got {type(func)}")

        # Calculate timeout hierarchy if llm_timeout is provided (Dynamic Timeout Calculation)
        if llm_timeout is not None:
            nonlocal max_execution_timeout, max_task_duration
            if max_execution_timeout is None:
                max_execution_timeout = (
                    llm_timeout * 2
                )  # Reserved timeout buffer for low-level retry
            if max_task_duration is None:
                max_task_duration = (
                    llm_timeout * 2 + 15
                )  # Reserved timeout buffer for health check phase

        queue = asyncio.PriorityQueue(maxsize=max_queue_size)
        tasks = set()
        initialization_lock = asyncio.Lock()
        counter = 0
        shutdown_event = asyncio.Event()
        initialized = False
        worker_health_check_task = None

        # Enhanced task state management
        task_states = {}  # task_id -> TaskState
        task_states_lock = asyncio.Lock()
        active_futures = weakref.WeakSet()
        reinit_count = 0

        async def worker():
            """Enhanced worker that processes tasks with proper timeout and state management"""
            try:
                while not shutdown_event.is_set():
                    try:
                        # Get task from queue with timeout for shutdown checking
                        try:
                            (
                                priority,
                                count,
                                task_id,
                                args,
                                kwargs,
                            ) = await asyncio.wait_for(queue.get(), timeout=1.0)
                        except asyncio.TimeoutError:
                            continue

                        # Get task state and mark worker as started
                        async with task_states_lock:
                            if task_id not in task_states:
                                queue.task_done()
                                continue
                            task_state = task_states[task_id]
                            task_state.worker_started = True
                            # Record execution start time when worker actually begins processing
                            task_state.execution_start_time = (
                                asyncio.get_event_loop().time()
                            )

                        # Check if task was cancelled before worker started
                        if (
                            task_state.cancellation_requested
                            or task_state.future.cancelled()
                        ):
                            async with task_states_lock:
                                task_states.pop(task_id, None)
                            queue.task_done()
                            continue

                        try:
                            # Execute function with timeout protection
                            if max_execution_timeout is not None:
                                result = await asyncio.wait_for(
                                    func(*args, **kwargs), timeout=max_execution_timeout
                                )
                            else:
                                result = await func(*args, **kwargs)

                            # Set result if future is still valid
                            if not task_state.future.done():
                                task_state.future.set_result(result)

                        except asyncio.TimeoutError:
                            # Worker-level timeout (max_execution_timeout exceeded)
                            logger.warning(
                                f"{queue_name}: Worker timeout for task {task_id} after {max_execution_timeout}s"
                            )
                            if not task_state.future.done():
                                task_state.future.set_exception(
                                    WorkerTimeoutError(
                                        max_execution_timeout, "execution"
                                    )
                                )
                        except asyncio.CancelledError:
                            # Task was cancelled during execution
                            if not task_state.future.done():
                                task_state.future.cancel()
                            logger.debug(
                                f"{queue_name}: Task {task_id} cancelled during execution"
                            )
                        except Exception as e:
                            # Function execution error
                            logger.error(
                                f"{queue_name}: Error in decorated function for task {task_id}: {str(e)}"
                            )
                            if not task_state.future.done():
                                task_state.future.set_exception(e)
                        finally:
                            # Clean up task state
                            async with task_states_lock:
                                task_states.pop(task_id, None)
                            queue.task_done()

                    except Exception as e:
                        # Critical error in worker loop
                        logger.error(
                            f"{queue_name}: Critical error in worker: {str(e)}"
                        )
                        await asyncio.sleep(0.1)
            finally:
                logger.debug(f"{queue_name}: Worker exiting")

        async def enhanced_health_check():
            """Enhanced health check with stuck task detection and recovery"""
            nonlocal initialized
            try:
                while not shutdown_event.is_set():
                    await asyncio.sleep(5)  # Check every 5 seconds

                    current_time = asyncio.get_event_loop().time()

                    # Detect and handle stuck tasks based on execution start time
                    if max_task_duration is not None:
                        stuck_tasks = []
                        async with task_states_lock:
                            for task_id, task_state in list(task_states.items()):
                                # Only check tasks that have started execution
                                if (
                                    task_state.worker_started
                                    and task_state.execution_start_time is not None
                                    and current_time - task_state.execution_start_time
                                    > max_task_duration
                                ):
                                    stuck_tasks.append(
                                        (
                                            task_id,
                                            current_time
                                            - task_state.execution_start_time,
                                        )
                                    )

                        # Force cleanup of stuck tasks
                        for task_id, execution_duration in stuck_tasks:
                            logger.warning(
                                f"{queue_name}: Detected stuck task {task_id} (execution time: {execution_duration:.1f}s), forcing cleanup"
                            )
                            async with task_states_lock:
                                if task_id in task_states:
                                    task_state = task_states[task_id]
                                    if not task_state.future.done():
                                        task_state.future.set_exception(
                                            HealthCheckTimeoutError(
                                                max_task_duration, execution_duration
                                            )
                                        )
                                    task_states.pop(task_id, None)

                    # Worker recovery logic
                    current_tasks = set(tasks)
                    done_tasks = {t for t in current_tasks if t.done()}
                    tasks.difference_update(done_tasks)

                    active_tasks_count = len(tasks)
                    workers_needed = max_size - active_tasks_count

                    if workers_needed > 0:
                        logger.info(
                            f"{queue_name}: Creating {workers_needed} new workers"
                        )
                        new_tasks = set()
                        for _ in range(workers_needed):
                            task = asyncio.create_task(worker())
                            new_tasks.add(task)
                            task.add_done_callback(tasks.discard)
                        tasks.update(new_tasks)

            except Exception as e:
                logger.error(f"{queue_name}: Error in enhanced health check: {str(e)}")
            finally:
                logger.debug(f"{queue_name}: Enhanced health check task exiting")
                initialized = False

        async def ensure_workers():
            """Ensure worker system is initialized with enhanced error handling"""
            nonlocal initialized, worker_health_check_task, tasks, reinit_count

            if initialized:
                return

            async with initialization_lock:
                if initialized:
                    return

                if reinit_count > 0:
                    reinit_count += 1
                    logger.warning(
                        f"{queue_name}: Reinitializing system (count: {reinit_count})"
                    )
                else:
                    reinit_count = 1

                # Clean up completed tasks
                current_tasks = set(tasks)
                done_tasks = {t for t in current_tasks if t.done()}
                tasks.difference_update(done_tasks)

                active_tasks_count = len(tasks)
                if active_tasks_count > 0 and reinit_count > 1:
                    logger.warning(
                        f"{queue_name}: {active_tasks_count} tasks still running during reinitialization"
                    )

                # Create worker tasks
                workers_needed = max_size - active_tasks_count
                for _ in range(workers_needed):
                    task = asyncio.create_task(worker())
                    tasks.add(task)
                    task.add_done_callback(tasks.discard)

                # Start enhanced health check
                worker_health_check_task = asyncio.create_task(enhanced_health_check())

                initialized = True
                # Log dynamic timeout configuration
                timeout_info = []
                if llm_timeout is not None:
                    timeout_info.append(f"Func: {llm_timeout}s")
                if max_execution_timeout is not None:
                    timeout_info.append(f"Worker: {max_execution_timeout}s")
                if max_task_duration is not None:
                    timeout_info.append(f"Health Check: {max_task_duration}s")

                timeout_str = (
                    f"(Timeouts: {', '.join(timeout_info)})" if timeout_info else ""
                )
                logger.info(
                    f"{queue_name}: {workers_needed} new workers initialized {timeout_str}"
                )

        async def shutdown():
            """Gracefully shut down all workers and cleanup resources"""
            logger.info(f"{queue_name}: Shutting down priority queue workers")

            shutdown_event.set()

            # Cancel all active futures
            for future in list(active_futures):
                if not future.done():
                    future.cancel()

            # Cancel all pending tasks
            async with task_states_lock:
                for task_id, task_state in list(task_states.items()):
                    if not task_state.future.done():
                        task_state.future.cancel()
                task_states.clear()

            # Wait for queue to empty with timeout
            try:
                await asyncio.wait_for(queue.join(), timeout=5.0)
            except asyncio.TimeoutError:
                logger.warning(
                    f"{queue_name}: Timeout waiting for queue to empty during shutdown"
                )

            # Cancel worker tasks
            for task in list(tasks):
                if not task.done():
                    task.cancel()

            # Wait for all tasks to complete
            if tasks:
                await asyncio.gather(*tasks, return_exceptions=True)

            # Cancel health check task
            if worker_health_check_task and not worker_health_check_task.done():
                worker_health_check_task.cancel()
                try:
                    await worker_health_check_task
                except asyncio.CancelledError:
                    pass

            logger.info(f"{queue_name}: Priority queue workers shutdown complete")

        @wraps(func)
        async def wait_func(
            *args, _priority=10, _timeout=None, _queue_timeout=None, **kwargs
        ):
            """
            Execute function with enhanced priority-based concurrency control and timeout handling

            Args:
                *args: Positional arguments passed to the function
                _priority: Call priority (lower values have higher priority)
                _timeout: Maximum time to wait for completion (in seconds, none means determinded by max_execution_timeout of the queue)
                _queue_timeout: Maximum time to wait for entering the queue (in seconds)
                **kwargs: Keyword arguments passed to the function

            Returns:
                The result of the function call

            Raises:
                TimeoutError: If the function call times out at any level
                QueueFullError: If the queue is full and waiting times out
                Any exception raised by the decorated function
            """
            await ensure_workers()

            # Generate unique task ID
            task_id = f"{id(asyncio.current_task())}_{asyncio.get_event_loop().time()}"
            future = asyncio.Future()

            # Create task state
            task_state = TaskState(
                future=future, start_time=asyncio.get_event_loop().time()
            )

            try:
                # Register task state
                async with task_states_lock:
                    task_states[task_id] = task_state

                active_futures.add(future)

                # Get counter for FIFO ordering
                nonlocal counter
                async with initialization_lock:
                    current_count = counter
                    counter += 1

                # Queue the task with timeout handling
                try:
                    if _queue_timeout is not None:
                        await asyncio.wait_for(
                            queue.put(
                                (_priority, current_count, task_id, args, kwargs)
                            ),
                            timeout=_queue_timeout,
                        )
                    else:
                        await queue.put(
                            (_priority, current_count, task_id, args, kwargs)
                        )
                except asyncio.TimeoutError:
                    raise QueueFullError(
                        f"{queue_name}: Queue full, timeout after {_queue_timeout} seconds"
                    )
                except Exception as e:
                    # Clean up on queue error
                    if not future.done():
                        future.set_exception(e)
                    raise

                # Wait for result with timeout handling
                try:
                    if _timeout is not None:
                        return await asyncio.wait_for(future, _timeout)
                    else:
                        return await future
                except asyncio.TimeoutError:
                    # This is user-level timeout (asyncio.wait_for caused)
                    # Mark cancellation request
                    async with task_states_lock:
                        if task_id in task_states:
                            task_states[task_id].cancellation_requested = True

                    # Cancel future
                    if not future.done():
                        future.cancel()

                    # Wait for worker cleanup with timeout
                    cleanup_start = asyncio.get_event_loop().time()
                    while (
                        task_id in task_states
                        and asyncio.get_event_loop().time() - cleanup_start
                        < cleanup_timeout
                    ):
                        await asyncio.sleep(0.1)

                    raise TimeoutError(
                        f"{queue_name}: User timeout after {_timeout} seconds"
                    )
                except WorkerTimeoutError as e:
                    # This is Worker-level timeout, directly propagate exception information
                    raise TimeoutError(f"{queue_name}: {str(e)}")
                except HealthCheckTimeoutError as e:
                    # This is Health Check-level timeout, directly propagate exception information
                    raise TimeoutError(f"{queue_name}: {str(e)}")

            finally:
                # Ensure cleanup
                active_futures.discard(future)
                async with task_states_lock:
                    task_states.pop(task_id, None)

        # Add shutdown method to decorated function
        wait_func.shutdown = shutdown

        return wait_func

    return final_decro


def wrap_embedding_func_with_attrs(**kwargs):
    """Decorator to add embedding dimension and token limit attributes to embedding functions.

    This decorator wraps an async embedding function and returns an EmbeddingFunc instance
    that automatically handles dimension parameter injection and attribute management.

    WARNING: DO NOT apply this decorator to wrapper functions that call other
    decorated embedding functions. This will cause double decoration and parameter
    injection conflicts.

    Correct usage patterns:

    1. Direct implementation (decorated):
        ```python
        @wrap_embedding_func_with_attrs(embedding_dim=1536)
        async def my_embed(texts, embedding_dim=None):
            # Direct implementation
            return embeddings
        ```

    2. Wrapper calling decorated function (DO NOT decorate wrapper):
        ```python
        # my_embed is already decorated above

        async def my_wrapper(texts, **kwargs):  # ❌ DO NOT decorate this!
            # Must call .func to access unwrapped implementation
            return await my_embed.func(texts, **kwargs)
        ```

    3. Wrapper calling decorated function (properly decorated):
        ```python
        @wrap_embedding_func_with_attrs(embedding_dim=1536)
        async def my_wrapper(texts, **kwargs):  # ✅ Can decorate if calling .func
            # Calling .func avoids double decoration
            return await my_embed.func(texts, **kwargs)
        ```

    The decorated function becomes an EmbeddingFunc instance with:
    - embedding_dim: The embedding dimension
    - max_token_size: Maximum token limit (optional)
    - func: The original unwrapped function (access via .func)
    - __call__: Wrapper that injects embedding_dim parameter

    Double decoration causes:
    - Double injection of embedding_dim parameter
    - Incorrect parameter passing to the underlying implementation
    - Runtime errors due to parameter conflicts

    Args:
        embedding_dim: The dimension of embedding vectors
        max_token_size: Maximum number of tokens (optional)
        send_dimensions: Whether to inject embedding_dim as a keyword argument (optional)

    Returns:
        A decorator that wraps the function as an EmbeddingFunc instance

    Example of correct wrapper implementation:
        ```python
        @wrap_embedding_func_with_attrs(embedding_dim=1536, max_token_size=8192)
        @retry(...)
        async def openai_embed(texts, ...):
            # Base implementation
            pass

        @wrap_embedding_func_with_attrs(embedding_dim=1536)  # Note: No @retry here!
        async def azure_openai_embed(texts, ...):
            # CRITICAL: Call .func to access unwrapped function
            return await openai_embed.func(texts, ...)  # ✅ Correct
            # return await openai_embed(texts, ...)     # ❌ Wrong - double decoration!
        ```
    """

    def final_decro(func) -> EmbeddingFunc:
        new_func = EmbeddingFunc(**kwargs, func=func)
        return new_func

    return final_decro


def load_json(file_name):
    if not os.path.exists(file_name):
        return None
    with open(file_name, encoding="utf-8-sig") as f:
        return json.load(f)


def _sanitize_string_for_json(text: str) -> str:
    """Remove characters that cannot be encoded in UTF-8 for JSON serialization.

    Uses regex for optimal performance with zero-copy optimization for clean strings.
    Fast detection path for clean strings (99% of cases) with efficient removal for dirty strings.

    Args:
        text: String to sanitize

    Returns:
        Original string if clean (zero-copy), sanitized string if dirty
    """
    if not text:
        return text

    # Fast path: Check if sanitization is needed using C-level regex search
    if not _SURROGATE_PATTERN.search(text):
        return text  # Zero-copy for clean strings - most common case

    # Slow path: Remove problematic characters using C-level regex substitution
    return _SURROGATE_PATTERN.sub("", text)


class SanitizingJSONEncoder(json.JSONEncoder):
    """
    Custom JSON encoder that sanitizes data during serialization.

    This encoder cleans strings during the encoding process without creating
    a full copy of the data structure, making it memory-efficient for large datasets.
    """

    def encode(self, o):
        """Override encode method to handle simple string cases"""
        if isinstance(o, str):
            return json.encoder.encode_basestring(_sanitize_string_for_json(o))
        return super().encode(o)

    def iterencode(self, o, _one_shot=False):
        """
        Override iterencode to sanitize strings during serialization.
        This is the core method that handles complex nested structures.
        """
        # Preprocess: sanitize all strings in the object
        sanitized = self._sanitize_for_encoding(o)

        # Call parent's iterencode with sanitized data
        for chunk in super().iterencode(sanitized, _one_shot):
            yield chunk

    def _sanitize_for_encoding(self, obj):
        """
        Recursively sanitize strings in an object.
        Creates new objects only when necessary to avoid deep copies.

        Args:
            obj: Object to sanitize

        Returns:
            Sanitized object with cleaned strings
        """
        if isinstance(obj, str):
            return _sanitize_string_for_json(obj)

        elif isinstance(obj, dict):
            # Create new dict with sanitized keys and values
            new_dict = {}
            for k, v in obj.items():
                clean_k = _sanitize_string_for_json(k) if isinstance(k, str) else k
                clean_v = self._sanitize_for_encoding(v)
                new_dict[clean_k] = clean_v
            return new_dict

        elif isinstance(obj, (list, tuple)):
            # Sanitize list/tuple elements
            cleaned = [self._sanitize_for_encoding(item) for item in obj]
            return type(obj)(cleaned) if isinstance(obj, tuple) else cleaned

        else:
            # Numbers, booleans, None, etc. remain unchanged
            return obj


def write_json(json_obj, file_name):
    """
    Write JSON data to file with optimized sanitization strategy.

    This function uses a two-stage approach:
    1. Fast path: Try direct serialization (works for clean data ~99% of time)
    2. Slow path: Use custom encoder that sanitizes during serialization

    The custom encoder approach avoids creating a deep copy of the data,
    making it memory-efficient. When sanitization occurs, the caller should
    reload the cleaned data from the file to update shared memory.

    Args:
        json_obj: Object to serialize (may be a shallow copy from shared memory)
        file_name: Output file path

    Returns:
        bool: True if sanitization was applied (caller should reload data),
              False if direct write succeeded (no reload needed)
    """
    try:
        # Strategy 1: Fast path - try direct serialization
        with open(file_name, "w", encoding="utf-8") as f:
            json.dump(json_obj, f, indent=2, ensure_ascii=False)
        return False  # No sanitization needed, no reload required

    except (UnicodeEncodeError, UnicodeDecodeError) as e:
        logger.debug(f"Direct JSON write failed, using sanitizing encoder: {e}")

    # Strategy 2: Use custom encoder (sanitizes during serialization, zero memory copy)
    with open(file_name, "w", encoding="utf-8") as f:
        json.dump(json_obj, f, indent=2, ensure_ascii=False, cls=SanitizingJSONEncoder)

    logger.info(f"JSON sanitization applied during write: {file_name}")
    return True  # Sanitization applied, reload recommended


class TokenizerInterface(Protocol):
    """
    Defines the interface for a tokenizer, requiring encode and decode methods.
    """

    def encode(self, content: str) -> List[int]:
        """Encodes a string into a list of tokens."""
        ...

    def decode(self, tokens: List[int]) -> str:
        """Decodes a list of tokens into a string."""
        ...


class Tokenizer:
    """
    A wrapper around a tokenizer to provide a consistent interface for encoding and decoding.
    """

    def __init__(self, model_name: str, tokenizer: TokenizerInterface):
        """
        Initializes the Tokenizer with a tokenizer model name and a tokenizer instance.

        Args:
            model_name: The associated model name for the tokenizer.
            tokenizer: An instance of a class implementing the TokenizerInterface.
        """
        self.model_name: str = model_name
        self.tokenizer: TokenizerInterface = tokenizer

    def encode(self, content: str) -> List[int]:
        """
        Encodes a string into a list of tokens using the underlying tokenizer.

        Args:
            content: The string to encode.

        Returns:
            A list of integer tokens.
        """
        return self.tokenizer.encode(content)

    def decode(self, tokens: List[int]) -> str:
        """
        Decodes a list of tokens into a string using the underlying tokenizer.

        Args:
            tokens: A list of integer tokens to decode.

        Returns:
            The decoded string.
        """
        return self.tokenizer.decode(tokens)


class TiktokenTokenizer(Tokenizer):
    """
    A Tokenizer implementation using the tiktoken library.
    """

    def __init__(self, model_name: str = "gpt-4o-mini"):
        """
        Initializes the TiktokenTokenizer with a specified model name.

        Args:
            model_name: The model name for the tiktoken tokenizer to use.  Defaults to "gpt-4o-mini".

        Raises:
            ImportError: If tiktoken is not installed.
            ValueError: If the model_name is invalid.
        """
        try:
            import tiktoken
        except ImportError:
            raise ImportError(
                "tiktoken is not installed. Please install it with `pip install tiktoken` or define custom `tokenizer_func`."
            )

        try:
            tokenizer = tiktoken.encoding_for_model(model_name)
            super().__init__(model_name=model_name, tokenizer=tokenizer)
        except KeyError:
            raise ValueError(f"Invalid model_name: {model_name}.")


def pack_user_ass_to_openai_messages(*args: str):
    roles = ["user", "assistant"]
    return [
        {"role": roles[i % 2], "content": content} for i, content in enumerate(args)
    ]


def split_string_by_multi_markers(content: str, markers: list[str]) -> list[str]:
    """Split a string by multiple markers"""
    if not markers:
        return [content]
    content = content if content is not None else ""
    results = re.split("|".join(re.escape(marker) for marker in markers), content)
    return [r.strip() for r in results if r.strip()]


def is_float_regex(value: str) -> bool:
    return bool(re.match(r"^[-+]?[0-9]*\.?[0-9]+$", value))


def truncate_list_by_token_size(
    list_data: list[Any],
    key: Callable[[Any], str],
    max_token_size: int,
    tokenizer: Tokenizer,
) -> list[int]:
    """Truncate a list of data by token size"""
    if max_token_size <= 0:
        return []
    tokens = 0
    for i, data in enumerate(list_data):
        tokens += len(tokenizer.encode(key(data)))
        if tokens > max_token_size:
            return list_data[:i]
    return list_data


def cosine_similarity(v1, v2):
    """Calculate cosine similarity between two vectors"""
    dot_product = np.dot(v1, v2)
    norm1 = np.linalg.norm(v1)
    norm2 = np.linalg.norm(v2)
    return dot_product / (norm1 * norm2)


async def handle_cache(
    hashing_kv,
    args_hash,
    prompt,
    mode="default",
    cache_type="unknown",
) -> tuple[str, int] | None:
    """Generic cache handling function with flattened cache keys

    Returns:
        tuple[str, int] | None: (content, create_time) if cache hit, None if cache miss
    """
    if hashing_kv is None:
        return None

    if mode != "default":  # handle cache for all type of query
        if not hashing_kv.global_config.get("enable_llm_cache"):
            return None
    else:  # handle cache for entity extraction
        if not hashing_kv.global_config.get("enable_llm_cache_for_entity_extract"):
            return None

    # Use flattened cache key format: {mode}:{cache_type}:{hash}
    flattened_key = generate_cache_key(mode, cache_type, args_hash)
    cache_entry = await hashing_kv.get_by_id(flattened_key)
    if cache_entry:
        logger.debug(f"Flattened cache hit(key:{flattened_key})")
        content = cache_entry["return"]
        timestamp = cache_entry.get("create_time", 0)
        return content, timestamp

    logger.debug(f"Cache missed(mode:{mode} type:{cache_type})")
    return None


@dataclass
class CacheData:
    args_hash: str
    content: str
    prompt: str
    mode: str = "default"
    cache_type: str = "query"
    chunk_id: str | None = None
    queryparam: dict | None = None


async def save_to_cache(hashing_kv, cache_data: CacheData):
    """Save data to cache using flattened key structure.

    Args:
        hashing_kv: The key-value storage for caching
        cache_data: The cache data to save
    """
    # Skip if storage is None or content is a streaming response
    if hashing_kv is None or not cache_data.content:
        return

    # If content is a streaming response, don't cache it
    if hasattr(cache_data.content, "__aiter__"):
        logger.debug("Streaming response detected, skipping cache")
        return

    # Use flattened cache key format: {mode}:{cache_type}:{hash}
    flattened_key = generate_cache_key(
        cache_data.mode, cache_data.cache_type, cache_data.args_hash
    )

    # Check if we already have identical content cached
    existing_cache = await hashing_kv.get_by_id(flattened_key)
    if existing_cache:
        existing_content = existing_cache.get("return")
        if existing_content == cache_data.content:
            logger.warning(
                f"Cache duplication detected for {flattened_key}, skipping update"
            )
            return

    # Create cache entry with flattened structure
    cache_entry = {
        "return": cache_data.content,
        "cache_type": cache_data.cache_type,
        "chunk_id": cache_data.chunk_id if cache_data.chunk_id is not None else None,
        "original_prompt": cache_data.prompt,
        "queryparam": cache_data.queryparam
        if cache_data.queryparam is not None
        else None,
    }

    logger.info(f" == LLM cache == saving: {flattened_key}")

    # Save using flattened key
    await hashing_kv.upsert({flattened_key: cache_entry})


def safe_unicode_decode(content):
    # Regular expression to find all Unicode escape sequences of the form \uXXXX
    unicode_escape_pattern = re.compile(r"\\u([0-9a-fA-F]{4})")

    # Function to replace the Unicode escape with the actual character
    def replace_unicode_escape(match):
        # Convert the matched hexadecimal value into the actual Unicode character
        return chr(int(match.group(1), 16))

    # Perform the substitution
    decoded_content = unicode_escape_pattern.sub(
        replace_unicode_escape, content.decode("utf-8")
    )

    return decoded_content


def exists_func(obj, func_name: str) -> bool:
    """Check if a function exists in an object or not.
    :param obj:
    :param func_name:
    :return: True / False
    """
    if callable(getattr(obj, func_name, None)):
        return True
    else:
        return False


def always_get_an_event_loop() -> asyncio.AbstractEventLoop:
    """
    Ensure that there is always an event loop available.

    This function tries to get the current event loop. If the current event loop is closed or does not exist,
    it creates a new event loop and sets it as the current event loop.

    Returns:
        asyncio.AbstractEventLoop: The current or newly created event loop.
    """
    try:
        # Try to get the current event loop
        current_loop = asyncio.get_event_loop()
        if current_loop.is_closed():
            raise RuntimeError("Event loop is closed.")
        return current_loop

    except RuntimeError:
        # If no event loop exists or it is closed, create a new one
        logger.info("Creating a new event loop in main thread.")
        new_loop = asyncio.new_event_loop()
        asyncio.set_event_loop(new_loop)
        return new_loop


async def aexport_data(
    chunk_entity_relation_graph,
    entities_vdb,
    relationships_vdb,
    output_path: str,
    file_format: str = "csv",
    include_vector_data: bool = False,
) -> None:
    """
    Asynchronously exports all entities, relations, and relationships to various formats.

    Args:
        chunk_entity_relation_graph: Graph storage instance for entities and relations
        entities_vdb: Vector database storage for entities
        relationships_vdb: Vector database storage for relationships
        output_path: The path to the output file (including extension).
        file_format: Output format - "csv", "excel", "md", "txt".
            - csv: Comma-separated values file
            - excel: Microsoft Excel file with multiple sheets
            - md: Markdown tables
            - txt: Plain text formatted output
        include_vector_data: Whether to include data from the vector database.
    """
    # Collect data
    entities_data = []
    relations_data = []
    relationships_data = []

    # --- Entities ---
    all_entities = await chunk_entity_relation_graph.get_all_labels()
    for entity_name in all_entities:
        # Get entity information from graph
        node_data = await chunk_entity_relation_graph.get_node(entity_name)
        source_id = node_data.get("source_id") if node_data else None

        entity_info = {
            "graph_data": node_data,
            "source_id": source_id,
        }

        # Optional: Get vector database information
        if include_vector_data:
            entity_id = compute_mdhash_id(entity_name, prefix="ent-")
            vector_data = await entities_vdb.get_by_id(entity_id)
            entity_info["vector_data"] = vector_data

        entity_row = {
            "entity_name": entity_name,
            "source_id": source_id,
            "graph_data": str(
                entity_info["graph_data"]
            ),  # Convert to string to ensure compatibility
        }
        if include_vector_data and "vector_data" in entity_info:
            entity_row["vector_data"] = str(entity_info["vector_data"])
        entities_data.append(entity_row)

    # --- Relations ---
    for src_entity in all_entities:
        for tgt_entity in all_entities:
            if src_entity == tgt_entity:
                continue

            edge_exists = await chunk_entity_relation_graph.has_edge(
                src_entity, tgt_entity
            )
            if edge_exists:
                # Get edge information from graph
                edge_data = await chunk_entity_relation_graph.get_edge(
                    src_entity, tgt_entity
                )
                source_id = edge_data.get("source_id") if edge_data else None

                relation_info = {
                    "graph_data": edge_data,
                    "source_id": source_id,
                }

                # Optional: Get vector database information
                if include_vector_data:
                    rel_id = compute_mdhash_id(src_entity + tgt_entity, prefix="rel-")
                    vector_data = await relationships_vdb.get_by_id(rel_id)
                    relation_info["vector_data"] = vector_data

                relation_row = {
                    "src_entity": src_entity,
                    "tgt_entity": tgt_entity,
                    "source_id": relation_info["source_id"],
                    "graph_data": str(relation_info["graph_data"]),  # Convert to string
                }
                if include_vector_data and "vector_data" in relation_info:
                    relation_row["vector_data"] = str(relation_info["vector_data"])
                relations_data.append(relation_row)

    # --- Relationships (from VectorDB) ---
    all_relationships = await relationships_vdb.client_storage
    for rel in all_relationships["data"]:
        relationships_data.append(
            {
                "relationship_id": rel["__id__"],
                "data": str(rel),  # Convert to string for compatibility
            }
        )

    # Export based on format
    if file_format == "csv":
        # CSV export
        with open(output_path, "w", newline="", encoding="utf-8") as csvfile:
            # Entities
            if entities_data:
                csvfile.write("# ENTITIES\n")
                writer = csv.DictWriter(csvfile, fieldnames=entities_data[0].keys())
                writer.writeheader()
                writer.writerows(entities_data)
                csvfile.write("\n\n")

            # Relations
            if relations_data:
                csvfile.write("# RELATIONS\n")
                writer = csv.DictWriter(csvfile, fieldnames=relations_data[0].keys())
                writer.writeheader()
                writer.writerows(relations_data)
                csvfile.write("\n\n")

            # Relationships
            if relationships_data:
                csvfile.write("# RELATIONSHIPS\n")
                writer = csv.DictWriter(
                    csvfile, fieldnames=relationships_data[0].keys()
                )
                writer.writeheader()
                writer.writerows(relationships_data)

    elif file_format == "excel":
        # Excel export
        import pandas as pd

        entities_df = pd.DataFrame(entities_data) if entities_data else pd.DataFrame()
        relations_df = (
            pd.DataFrame(relations_data) if relations_data else pd.DataFrame()
        )
        relationships_df = (
            pd.DataFrame(relationships_data) if relationships_data else pd.DataFrame()
        )

        with pd.ExcelWriter(output_path, engine="xlsxwriter") as writer:
            if not entities_df.empty:
                entities_df.to_excel(writer, sheet_name="Entities", index=False)
            if not relations_df.empty:
                relations_df.to_excel(writer, sheet_name="Relations", index=False)
            if not relationships_df.empty:
                relationships_df.to_excel(
                    writer, sheet_name="Relationships", index=False
                )

    elif file_format == "md":
        # Markdown export
        with open(output_path, "w", encoding="utf-8") as mdfile:
            mdfile.write("# LightRAG Data Export\n\n")

            # Entities
            mdfile.write("## Entities\n\n")
            if entities_data:
                # Write header
                mdfile.write("| " + " | ".join(entities_data[0].keys()) + " |\n")
                mdfile.write(
                    "| " + " | ".join(["---"] * len(entities_data[0].keys())) + " |\n"
                )

                # Write rows
                for entity in entities_data:
                    mdfile.write(
                        "| " + " | ".join(str(v) for v in entity.values()) + " |\n"
                    )
                mdfile.write("\n\n")
            else:
                mdfile.write("*No entity data available*\n\n")

            # Relations
            mdfile.write("## Relations\n\n")
            if relations_data:
                # Write header
                mdfile.write("| " + " | ".join(relations_data[0].keys()) + " |\n")
                mdfile.write(
                    "| " + " | ".join(["---"] * len(relations_data[0].keys())) + " |\n"
                )

                # Write rows
                for relation in relations_data:
                    mdfile.write(
                        "| " + " | ".join(str(v) for v in relation.values()) + " |\n"
                    )
                mdfile.write("\n\n")
            else:
                mdfile.write("*No relation data available*\n\n")

            # Relationships
            mdfile.write("## Relationships\n\n")
            if relationships_data:
                # Write header
                mdfile.write("| " + " | ".join(relationships_data[0].keys()) + " |\n")
                mdfile.write(
                    "| "
                    + " | ".join(["---"] * len(relationships_data[0].keys()))
                    + " |\n"
                )

                # Write rows
                for relationship in relationships_data:
                    mdfile.write(
                        "| "
                        + " | ".join(str(v) for v in relationship.values())
                        + " |\n"
                    )
            else:
                mdfile.write("*No relationship data available*\n\n")

    elif file_format == "txt":
        # Plain text export
        with open(output_path, "w", encoding="utf-8") as txtfile:
            txtfile.write("LIGHTRAG DATA EXPORT\n")
            txtfile.write("=" * 80 + "\n\n")

            # Entities
            txtfile.write("ENTITIES\n")
            txtfile.write("-" * 80 + "\n")
            if entities_data:
                # Create fixed width columns
                col_widths = {
                    k: max(len(k), max(len(str(e[k])) for e in entities_data))
                    for k in entities_data[0]
                }
                header = "  ".join(k.ljust(col_widths[k]) for k in entities_data[0])
                txtfile.write(header + "\n")
                txtfile.write("-" * len(header) + "\n")

                # Write rows
                for entity in entities_data:
                    row = "  ".join(
                        str(v).ljust(col_widths[k]) for k, v in entity.items()
                    )
                    txtfile.write(row + "\n")
                txtfile.write("\n\n")
            else:
                txtfile.write("No entity data available\n\n")

            # Relations
            txtfile.write("RELATIONS\n")
            txtfile.write("-" * 80 + "\n")
            if relations_data:
                # Create fixed width columns
                col_widths = {
                    k: max(len(k), max(len(str(r[k])) for r in relations_data))
                    for k in relations_data[0]
                }
                header = "  ".join(k.ljust(col_widths[k]) for k in relations_data[0])
                txtfile.write(header + "\n")
                txtfile.write("-" * len(header) + "\n")

                # Write rows
                for relation in relations_data:
                    row = "  ".join(
                        str(v).ljust(col_widths[k]) for k, v in relation.items()
                    )
                    txtfile.write(row + "\n")
                txtfile.write("\n\n")
            else:
                txtfile.write("No relation data available\n\n")

            # Relationships
            txtfile.write("RELATIONSHIPS\n")
            txtfile.write("-" * 80 + "\n")
            if relationships_data:
                # Create fixed width columns
                col_widths = {
                    k: max(len(k), max(len(str(r[k])) for r in relationships_data))
                    for k in relationships_data[0]
                }
                header = "  ".join(
                    k.ljust(col_widths[k]) for k in relationships_data[0]
                )
                txtfile.write(header + "\n")
                txtfile.write("-" * len(header) + "\n")

                # Write rows
                for relationship in relationships_data:
                    row = "  ".join(
                        str(v).ljust(col_widths[k]) for k, v in relationship.items()
                    )
                    txtfile.write(row + "\n")
            else:
                txtfile.write("No relationship data available\n\n")

    else:
        raise ValueError(
            f"Unsupported file format: {file_format}. Choose from: csv, excel, md, txt"
        )
    if file_format is not None:
        print(f"Data exported to: {output_path} with format: {file_format}")
    else:
        print("Data displayed as table format")


def export_data(
    chunk_entity_relation_graph,
    entities_vdb,
    relationships_vdb,
    output_path: str,
    file_format: str = "csv",
    include_vector_data: bool = False,
) -> None:
    """
    Synchronously exports all entities, relations, and relationships to various formats.

    Args:
        chunk_entity_relation_graph: Graph storage instance for entities and relations
        entities_vdb: Vector database storage for entities
        relationships_vdb: Vector database storage for relationships
        output_path: The path to the output file (including extension).
        file_format: Output format - "csv", "excel", "md", "txt".
            - csv: Comma-separated values file
            - excel: Microsoft Excel file with multiple sheets
            - md: Markdown tables
            - txt: Plain text formatted output
        include_vector_data: Whether to include data from the vector database.
    """
    try:
        loop = asyncio.get_event_loop()
    except RuntimeError:
        loop = asyncio.new_event_loop()
        asyncio.set_event_loop(loop)

    loop.run_until_complete(
        aexport_data(
            chunk_entity_relation_graph,
            entities_vdb,
            relationships_vdb,
            output_path,
            file_format,
            include_vector_data,
        )
    )


def lazy_external_import(module_name: str, class_name: str) -> Callable[..., Any]:
    """Lazily import a class from an external module based on the package of the caller."""
    # Get the caller's module and package
    import inspect

    caller_frame = inspect.currentframe().f_back
    module = inspect.getmodule(caller_frame)
    package = module.__package__ if module else None

    def import_class(*args: Any, **kwargs: Any):
        import importlib

        module = importlib.import_module(module_name, package=package)
        cls = getattr(module, class_name)
        return cls(*args, **kwargs)

    return import_class


async def update_chunk_cache_list(
    chunk_id: str,
    text_chunks_storage: "BaseKVStorage",
    cache_keys: list[str],
    cache_scenario: str = "batch_update",
) -> None:
    """Update chunk's llm_cache_list with the given cache keys

    Args:
        chunk_id: Chunk identifier
        text_chunks_storage: Text chunks storage instance
        cache_keys: List of cache keys to add to the list
        cache_scenario: Description of the cache scenario for logging
    """
    if not cache_keys:
        return

    try:
        chunk_data = await text_chunks_storage.get_by_id(chunk_id)
        if chunk_data:
            # Ensure llm_cache_list exists
            if "llm_cache_list" not in chunk_data:
                chunk_data["llm_cache_list"] = []

            # Add cache keys to the list if not already present
            existing_keys = set(chunk_data["llm_cache_list"])
            new_keys = [key for key in cache_keys if key not in existing_keys]

            if new_keys:
                chunk_data["llm_cache_list"].extend(new_keys)

                # Update the chunk in storage
                await text_chunks_storage.upsert({chunk_id: chunk_data})
                logger.debug(
                    f"Updated chunk {chunk_id} with {len(new_keys)} cache keys ({cache_scenario})"
                )
    except Exception as e:
        logger.warning(
            f"Failed to update chunk {chunk_id} with cache references on {cache_scenario}: {e}"
        )


def remove_think_tags(text: str) -> str:
    """Remove <think>...</think> tags from the text
    Remove  orphon ...</think> tags from the text also"""
    return re.sub(
        r"^(<think>.*?</think>|.*</think>)", "", text, flags=re.DOTALL
    ).strip()


async def use_llm_func_with_cache(
    user_prompt: str,
    use_llm_func: callable,
    llm_response_cache: "BaseKVStorage | None" = None,
    system_prompt: str | None = None,
    max_tokens: int = None,
    history_messages: list[dict[str, str]] = None,
    cache_type: str = "extract",
    chunk_id: str | None = None,
    cache_keys_collector: list = None,
) -> tuple[str, int]:
    """Call LLM function with cache support and text sanitization

    If cache is available and enabled (determined by handle_cache based on mode),
    retrieve result from cache; otherwise call LLM function and save result to cache.

    This function applies text sanitization to prevent UTF-8 encoding errors for all LLM providers.

    Args:
        input_text: Input text to send to LLM
        use_llm_func: LLM function with higher priority
        llm_response_cache: Cache storage instance
        max_tokens: Maximum tokens for generation
        history_messages: History messages list
        cache_type: Type of cache
        chunk_id: Chunk identifier to store in cache
        text_chunks_storage: Text chunks storage to update llm_cache_list
        cache_keys_collector: Optional list to collect cache keys for batch processing

    Returns:
        tuple[str, int]: (LLM response text, timestamp)
            - For cache hits: (content, cache_create_time)
            - For cache misses: (content, current_timestamp)
    """
    # Sanitize input text to prevent UTF-8 encoding errors for all LLM providers
    safe_user_prompt = sanitize_text_for_encoding(user_prompt)
    safe_system_prompt = (
        sanitize_text_for_encoding(system_prompt) if system_prompt else None
    )

    # Sanitize history messages if provided
    safe_history_messages = None
    if history_messages:
        safe_history_messages = []
        for i, msg in enumerate(history_messages):
            safe_msg = msg.copy()
            if "content" in safe_msg:
                safe_msg["content"] = sanitize_text_for_encoding(safe_msg["content"])
            safe_history_messages.append(safe_msg)
        history = json.dumps(safe_history_messages, ensure_ascii=False)
    else:
        history = None

    if llm_response_cache:
        prompt_parts = []
        if safe_user_prompt:
            prompt_parts.append(safe_user_prompt)
        if safe_system_prompt:
            prompt_parts.append(safe_system_prompt)
        if history:
            prompt_parts.append(history)
        _prompt = "\n".join(prompt_parts)

        arg_hash = compute_args_hash(_prompt)
        # Generate cache key for this LLM call
        cache_key = generate_cache_key("default", cache_type, arg_hash)

        cached_result = await handle_cache(
            llm_response_cache,
            arg_hash,
            _prompt,
            "default",
            cache_type=cache_type,
        )
        if cached_result:
            content, timestamp = cached_result
            logger.debug(f"Found cache for {arg_hash}")
            statistic_data["llm_cache"] += 1

            # Add cache key to collector if provided
            if cache_keys_collector is not None:
                cache_keys_collector.append(cache_key)

            return content, timestamp
        statistic_data["llm_call"] += 1

        # Call LLM with sanitized input
        kwargs = {}
        if safe_history_messages:
            kwargs["history_messages"] = safe_history_messages
        if max_tokens is not None:
            kwargs["max_tokens"] = max_tokens

        res: str = await use_llm_func(
            safe_user_prompt, system_prompt=safe_system_prompt, **kwargs
        )

        res = remove_think_tags(res)

        # Generate timestamp for cache miss (LLM call completion time)
        current_timestamp = int(time.time())

        if llm_response_cache.global_config.get("enable_llm_cache_for_entity_extract"):
            await save_to_cache(
                llm_response_cache,
                CacheData(
                    args_hash=arg_hash,
                    content=res,
                    prompt=_prompt,
                    cache_type=cache_type,
                    chunk_id=chunk_id,
                ),
            )

            # Add cache key to collector if provided
            if cache_keys_collector is not None:
                cache_keys_collector.append(cache_key)

        return res, current_timestamp

    # When cache is disabled, directly call LLM with sanitized input
    kwargs = {}
    if safe_history_messages:
        kwargs["history_messages"] = safe_history_messages
    if max_tokens is not None:
        kwargs["max_tokens"] = max_tokens

    try:
        res = await use_llm_func(
            safe_user_prompt, system_prompt=safe_system_prompt, **kwargs
        )
    except Exception as e:
        # Add [LLM func] prefix to error message
        error_msg = f"[LLM func] {str(e)}"
        # Re-raise with the same exception type but modified message
        raise type(e)(error_msg) from e

    # Generate timestamp for non-cached LLM call
    current_timestamp = int(time.time())
    return remove_think_tags(res), current_timestamp


def get_content_summary(content: str, max_length: int = 250) -> str:
    """Get summary of document content

    Args:
        content: Original document content
        max_length: Maximum length of summary

    Returns:
        Truncated content with ellipsis if needed
    """
    content = content.strip()
    if len(content) <= max_length:
        return content
    return content[:max_length] + "..."


def sanitize_and_normalize_extracted_text(
    input_text: str, remove_inner_quotes=False
) -> str:
    """Santitize and normalize extracted text
    Args:
        input_text: text string to be processed
        is_name: whether the input text is a entity or relation name

    Returns:
        Santitized and normalized text string
    """
    safe_input_text = sanitize_text_for_encoding(input_text)
    if safe_input_text:
        normalized_text = normalize_extracted_info(
            safe_input_text, remove_inner_quotes=remove_inner_quotes
        )
        return normalized_text
    return ""


def normalize_extracted_info(name: str, remove_inner_quotes=False) -> str:
    """Normalize entity/relation names and description with the following rules:
    - Clean HTML tags (paragraph and line break tags)
    - Convert Chinese symbols to English symbols
    - Remove spaces between Chinese characters
    - Remove spaces between Chinese characters and English letters/numbers
    - Preserve spaces within English text and numbers
    - Replace Chinese parentheses with English parentheses
    - Replace Chinese dash with English dash
    - Remove English quotation marks from the beginning and end of the text
    - Remove English quotation marks in and around chinese
    - Remove Chinese quotation marks
    - Filter out short numeric-only text (length < 3 and only digits/dots)
    - remove_inner_quotes = True
        remove Chinese quotes
        remove English quotes in and around chinese
        Convert non-breaking spaces to regular spaces
        Convert narrow non-breaking spaces after non-digits to regular spaces

    Args:
        name: Entity name to normalize
        is_entity: Whether this is an entity name (affects quote handling)

    Returns:
        Normalized entity name
    """
    # Clean HTML tags - remove paragraph and line break tags
    name = re.sub(r"</p\s*>|<p\s*>|<p/>", "", name, flags=re.IGNORECASE)
    name = re.sub(r"</br\s*>|<br\s*>|<br/>", "", name, flags=re.IGNORECASE)

    # Chinese full-width letters to half-width (A-Z, a-z)
    name = name.translate(
        str.maketrans(
            "ＡＢＣＤＥＦＧＨＩＪＫＬＭＮＯＰＱＲＳＴＵＶＷＸＹＺａｂｃｄｅｆｇｈｉｊｋｌｍｎｏｐｑｒｓｔｕｖｗｘｙｚ",
            "ABCDEFGHIJKLMNOPQRSTUVWXYZabcdefghijklmnopqrstuvwxyz",
        )
    )

    # Chinese full-width numbers to half-width
    name = name.translate(str.maketrans("０１２３４５６７８９", "0123456789"))

    # Chinese full-width symbols to half-width
    name = name.replace("－", "-")  # Chinese minus
    name = name.replace("＋", "+")  # Chinese plus
    name = name.replace("／", "/")  # Chinese slash
    name = name.replace("＊", "*")  # Chinese asterisk

    # Replace Chinese parentheses with English parentheses
    name = name.replace("（", "(").replace("）", ")")

    # Replace Chinese dash with English dash (additional patterns)
    name = name.replace("—", "-").replace("－", "-")

    # Chinese full-width space to regular space (after other replacements)
    name = name.replace("　", " ")

    # Use regex to remove spaces between Chinese characters
    # Regex explanation:
    # (?<=[\u4e00-\u9fa5]): Positive lookbehind for Chinese character
    # \s+: One or more whitespace characters
    # (?=[\u4e00-\u9fa5]): Positive lookahead for Chinese character
    name = re.sub(r"(?<=[\u4e00-\u9fa5])\s+(?=[\u4e00-\u9fa5])", "", name)

    # Remove spaces between Chinese and English/numbers/symbols
    name = re.sub(
        r"(?<=[\u4e00-\u9fa5])\s+(?=[a-zA-Z0-9\(\)\[\]@#$%!&\*\-=+_])", "", name
    )
    name = re.sub(
        r"(?<=[a-zA-Z0-9\(\)\[\]@#$%!&\*\-=+_])\s+(?=[\u4e00-\u9fa5])", "", name
    )

    # Remove outer quotes
    if len(name) >= 2:
        # Handle double quotes
        if name.startswith('"') and name.endswith('"'):
            inner_content = name[1:-1]
            if '"' not in inner_content:  # No double quotes inside
                name = inner_content

        # Handle single quotes
        if name.startswith("'") and name.endswith("'"):
            inner_content = name[1:-1]
            if "'" not in inner_content:  # No single quotes inside
                name = inner_content

        # Handle Chinese-style double quotes
        if name.startswith("“") and name.endswith("”"):
            inner_content = name[1:-1]
            if "“" not in inner_content and "”" not in inner_content:
                name = inner_content
        if name.startswith("‘") and name.endswith("’"):
            inner_content = name[1:-1]
            if "‘" not in inner_content and "’" not in inner_content:
                name = inner_content

        # Handle Chinese-style book title mark
        if name.startswith("《") and name.endswith("》"):
            inner_content = name[1:-1]
            if "《" not in inner_content and "》" not in inner_content:
                name = inner_content

    if remove_inner_quotes:
        # Remove Chinese quotes
        name = name.replace("“", "").replace("”", "").replace("‘", "").replace("’", "")
        # Remove English queotes in and around chinese
        name = re.sub(r"['\"]+(?=[\u4e00-\u9fa5])", "", name)
        name = re.sub(r"(?<=[\u4e00-\u9fa5])['\"]+", "", name)
        # Convert non-breaking space to regular space
        name = name.replace("\u00a0", " ")
        # Convert narrow non-breaking space to regular space when after non-digits
        name = re.sub(r"(?<=[^\d])\u202F", " ", name)

    # Remove spaces from the beginning and end of the text
    name = name.strip()

    # Filter out pure numeric content with length < 3
    if len(name) < 3 and re.match(r"^[0-9]+$", name):
        return ""

    def should_filter_by_dots(text):
        """
        Check if the string consists only of dots and digits, with at least one dot
        Filter cases include: 1.2.3, 12.3, .123, 123., 12.3., .1.23 etc.
        """
        return all(c.isdigit() or c == "." for c in text) and "." in text

    if len(name) < 6 and should_filter_by_dots(name):
        # Filter out mixed numeric and dot content with length < 6
        return ""
        # Filter out mixed numeric and dot content with length < 6, requiring at least one dot
        return ""

    return name


def sanitize_text_for_encoding(text: str, replacement_char: str = "") -> str:
    """Sanitize text to ensure safe UTF-8 encoding by removing or replacing problematic characters.

    This function handles:
    - Surrogate characters (the main cause of encoding errors)
    - Other invalid Unicode sequences
    - Control characters that might cause issues
    - Unescape HTML escapes
    - Remove control characters
    - Whitespace trimming

    Args:
        text: Input text to sanitize
        replacement_char: Character to use for replacing invalid sequences

    Returns:
        Sanitized text that can be safely encoded as UTF-8

    Raises:
        ValueError: When text contains uncleanable encoding issues that cannot be safely processed
    """
    if not text:
        return text

    try:
        # First, strip whitespace
        text = text.strip()

        # Early return if text is empty after basic cleaning
        if not text:
            return text

        # Try to encode/decode to catch any encoding issues early
        text.encode("utf-8")

        # Remove or replace surrogate characters (U+D800 to U+DFFF)
        # These are the main cause of the encoding error
        sanitized = ""
        for char in text:
            code_point = ord(char)
            # Check for surrogate characters
            if 0xD800 <= code_point <= 0xDFFF:
                # Replace surrogate with replacement character
                sanitized += replacement_char
                continue
            # Check for other problematic characters
            elif code_point == 0xFFFE or code_point == 0xFFFF:
                # These are non-characters in Unicode
                sanitized += replacement_char
                continue
            else:
                sanitized += char

        # Additional cleanup: remove null bytes and other control characters that might cause issues
        # (but preserve common whitespace like \t, \n, \r)
        sanitized = re.sub(
            r"[\x00-\x08\x0B\x0C\x0E-\x1F\x7F]", replacement_char, sanitized
        )

        # Test final encoding to ensure it's safe
        sanitized.encode("utf-8")

        # Unescape HTML escapes
        sanitized = html.unescape(sanitized)

        # Remove control characters but preserve common whitespace (\t, \n, \r)
        sanitized = re.sub(r"[\x00-\x08\x0B\x0C\x0E-\x1F\x7F-\x9F]", "", sanitized)

        return sanitized.strip()

    except UnicodeEncodeError as e:
        # Critical change: Don't return placeholder, raise exception for caller to handle
        error_msg = f"Text contains uncleanable UTF-8 encoding issues: {str(e)[:100]}"
        logger.error(f"Text sanitization failed: {error_msg}")
        raise ValueError(error_msg) from e

    except Exception as e:
        logger.error(f"Text sanitization: Unexpected error: {str(e)}")
        # For other exceptions, if no encoding issues detected, return original text
        try:
            text.encode("utf-8")
            return text
        except UnicodeEncodeError:
            raise ValueError(
                f"Text sanitization failed with unexpected error: {str(e)}"
            ) from e


def check_storage_env_vars(storage_name: str) -> None:
    """Check if all required environment variables for storage implementation exist

    Args:
        storage_name: Storage implementation name

    Raises:
        ValueError: If required environment variables are missing
    """
    from lightrag.kg import STORAGE_ENV_REQUIREMENTS

    required_vars = STORAGE_ENV_REQUIREMENTS.get(storage_name, [])
    missing_vars = [var for var in required_vars if var not in os.environ]

    if missing_vars:
        raise ValueError(
            f"Storage implementation '{storage_name}' requires the following "
            f"environment variables: {', '.join(missing_vars)}"
        )


def pick_by_weighted_polling(
    entities_or_relations: list[dict],
    max_related_chunks: int,
    min_related_chunks: int = 1,
) -> list[str]:
    """
    Linear gradient weighted polling algorithm for text chunk selection.

    This algorithm ensures that entities/relations with higher importance get more text chunks,
    forming a linear decreasing allocation pattern.

    Args:
        entities_or_relations: List of entities or relations sorted by importance (high to low)
        max_related_chunks: Expected number of text chunks for the highest importance entity/relation
        min_related_chunks: Expected number of text chunks for the lowest importance entity/relation

    Returns:
        List of selected text chunk IDs
    """
    if not entities_or_relations:
        return []

    n = len(entities_or_relations)
    if n == 1:
        # Only one entity/relation, return its first max_related_chunks text chunks
        entity_chunks = entities_or_relations[0].get("sorted_chunks", [])
        return entity_chunks[:max_related_chunks]

    # Calculate expected text chunk count for each position (linear decrease)
    expected_counts = []
    for i in range(n):
        # Linear interpolation: from max_related_chunks to min_related_chunks
        ratio = i / (n - 1) if n > 1 else 0
        expected = max_related_chunks - ratio * (
            max_related_chunks - min_related_chunks
        )
        expected_counts.append(int(round(expected)))

    # First round allocation: allocate by expected values
    selected_chunks = []
    used_counts = []  # Track number of chunks used by each entity
    total_remaining = 0  # Accumulate remaining quotas

    for i, entity_rel in enumerate(entities_or_relations):
        entity_chunks = entity_rel.get("sorted_chunks", [])
        expected = expected_counts[i]

        # Actual allocatable count
        actual = min(expected, len(entity_chunks))
        selected_chunks.extend(entity_chunks[:actual])
        used_counts.append(actual)

        # Accumulate remaining quota
        remaining = expected - actual
        if remaining > 0:
            total_remaining += remaining

    # Second round allocation: multi-round scanning to allocate remaining quotas
    for _ in range(total_remaining):
        allocated = False

        # Scan entities one by one, allocate one chunk when finding unused chunks
        for i, entity_rel in enumerate(entities_or_relations):
            entity_chunks = entity_rel.get("sorted_chunks", [])

            # Check if there are still unused chunks
            if used_counts[i] < len(entity_chunks):
                # Allocate one chunk
                selected_chunks.append(entity_chunks[used_counts[i]])
                used_counts[i] += 1
                allocated = True
                break

        # If no chunks were allocated in this round, all entities are exhausted
        if not allocated:
            break

    return selected_chunks


async def pick_by_vector_similarity(
    query: str,
    text_chunks_storage: "BaseKVStorage",
    chunks_vdb: "BaseVectorStorage",
    num_of_chunks: int,
    entity_info: list[dict[str, Any]],
    embedding_func: callable,
    query_embedding=None,
) -> list[str]:
    """
    Vector similarity-based text chunk selection algorithm.

    This algorithm selects text chunks based on cosine similarity between
    the query embedding and text chunk embeddings.

    Args:
        query: User's original query string
        text_chunks_storage: Text chunks storage instance
        chunks_vdb: Vector database storage for chunks
        num_of_chunks: Number of chunks to select
        entity_info: List of entity information containing chunk IDs
        embedding_func: Embedding function to compute query embedding

    Returns:
        List of selected text chunk IDs sorted by similarity (highest first)
    """
    logger.debug(
        f"Vector similarity chunk selection: num_of_chunks={num_of_chunks}, entity_info_count={len(entity_info) if entity_info else 0}"
    )

    if not entity_info or num_of_chunks <= 0:
        return []

    # Collect all unique chunk IDs from entity info
    all_chunk_ids = set()
    for i, entity in enumerate(entity_info):
        chunk_ids = entity.get("sorted_chunks", [])
        all_chunk_ids.update(chunk_ids)

    if not all_chunk_ids:
        logger.warning(
            "Vector similarity chunk selection:  no chunk IDs found in entity_info"
        )
        return []

    logger.debug(
        f"Vector similarity chunk selection: {len(all_chunk_ids)} unique chunk IDs collected"
    )

    all_chunk_ids = list(all_chunk_ids)

    try:
        # Use pre-computed query embedding if provided, otherwise compute it
        if query_embedding is None:
            query_embedding = await embedding_func([query])
            query_embedding = query_embedding[
                0
            ]  # Extract first embedding from batch result
            logger.debug(
                "Computed query embedding for vector similarity chunk selection"
            )
        else:
            logger.debug(
                "Using pre-computed query embedding for vector similarity chunk selection"
            )

        # Get chunk embeddings from vector database
        chunk_vectors = await chunks_vdb.get_vectors_by_ids(all_chunk_ids)
        logger.debug(
            f"Vector similarity chunk selection: {len(chunk_vectors)} chunk vectors Retrieved"
        )

        if not chunk_vectors or len(chunk_vectors) != len(all_chunk_ids):
            if not chunk_vectors:
                logger.warning(
                    "Vector similarity chunk selection: no vectors retrieved from chunks_vdb"
                )
            else:
                logger.warning(
                    f"Vector similarity chunk selection: found {len(chunk_vectors)} but expecting {len(all_chunk_ids)}"
                )
            return []

        # Calculate cosine similarities
        similarities = []
        valid_vectors = 0
        for chunk_id in all_chunk_ids:
            if chunk_id in chunk_vectors:
                chunk_embedding = chunk_vectors[chunk_id]
                try:
                    # Calculate cosine similarity
                    similarity = cosine_similarity(query_embedding, chunk_embedding)
                    similarities.append((chunk_id, similarity))
                    valid_vectors += 1
                except Exception as e:
                    logger.warning(
                        f"Vector similarity chunk selection: failed to calculate similarity for chunk {chunk_id}: {e}"
                    )
            else:
                logger.warning(
                    f"Vector similarity chunk selection:  no vector found for chunk {chunk_id}"
                )

        # Sort by similarity (highest first) and select top num_of_chunks
        similarities.sort(key=lambda x: x[1], reverse=True)
        selected_chunks = [chunk_id for chunk_id, _ in similarities[:num_of_chunks]]

        logger.debug(
            f"Vector similarity chunk selection: {len(selected_chunks)} chunks from {len(all_chunk_ids)} candidates"
        )

        return selected_chunks

    except Exception as e:
        logger.error(f"[VECTOR_SIMILARITY] Error in vector similarity sorting: {e}")
        import traceback

        logger.error(f"[VECTOR_SIMILARITY] Traceback: {traceback.format_exc()}")
        # Fallback to simple truncation
        logger.debug("[VECTOR_SIMILARITY] Falling back to simple truncation")
        return all_chunk_ids[:num_of_chunks]


class TokenTracker:
    """Track token usage for LLM calls."""

    def __init__(self):
        self.reset()

    def __enter__(self):
        self.reset()
        return self

    def __exit__(self, exc_type, exc_val, exc_tb):
        print(self)

    def reset(self):
        self.prompt_tokens = 0
        self.completion_tokens = 0
        self.total_tokens = 0
        self.call_count = 0

    def add_usage(self, token_counts):
        """Add token usage from one LLM call.

        Args:
            token_counts: A dictionary containing prompt_tokens, completion_tokens, total_tokens
        """
        self.prompt_tokens += token_counts.get("prompt_tokens", 0)
        self.completion_tokens += token_counts.get("completion_tokens", 0)

        # If total_tokens is provided, use it directly; otherwise calculate the sum
        if "total_tokens" in token_counts:
            self.total_tokens += token_counts["total_tokens"]
        else:
            self.total_tokens += token_counts.get(
                "prompt_tokens", 0
            ) + token_counts.get("completion_tokens", 0)

        self.call_count += 1

    def get_usage(self):
        """Get current usage statistics."""
        return {
            "prompt_tokens": self.prompt_tokens,
            "completion_tokens": self.completion_tokens,
            "total_tokens": self.total_tokens,
            "call_count": self.call_count,
        }

    def __str__(self):
        usage = self.get_usage()
        return (
            f"LLM call count: {usage['call_count']}, "
            f"Prompt tokens: {usage['prompt_tokens']}, "
            f"Completion tokens: {usage['completion_tokens']}, "
            f"Total tokens: {usage['total_tokens']}"
        )


async def apply_rerank_if_enabled(
    query: str,
    retrieved_docs: list[dict],
    global_config: dict,
    enable_rerank: bool = True,
    top_n: int = None,
) -> list[dict]:
    """
    Apply reranking to retrieved documents if rerank is enabled.

    Args:
        query: The search query
        retrieved_docs: List of retrieved documents
        global_config: Global configuration containing rerank settings
        enable_rerank: Whether to enable reranking from query parameter
        top_n: Number of top documents to return after reranking

    Returns:
        Reranked documents if rerank is enabled, otherwise original documents
    """
    if not enable_rerank or not retrieved_docs:
        return retrieved_docs

    rerank_func = global_config.get("rerank_model_func")
    if not rerank_func:
        logger.warning(
            "Rerank is enabled but no rerank model is configured. Please set up a rerank model or set enable_rerank=False in query parameters."
        )
        return retrieved_docs

    try:
        # Extract document content for reranking
        document_texts = []
        for doc in retrieved_docs:
            # Try multiple possible content fields
            content = (
                doc.get("content")
                or doc.get("text")
                or doc.get("chunk_content")
                or doc.get("document")
                or str(doc)
            )
            document_texts.append(content)

        # Call the new rerank function that returns index-based results
        rerank_results = await rerank_func(
            query=query,
            documents=document_texts,
            top_n=top_n,
        )

        # Process rerank results based on return format
        if rerank_results and len(rerank_results) > 0:
            # Check if results are in the new index-based format
            if isinstance(rerank_results[0], dict) and "index" in rerank_results[0]:
                # New format: [{"index": 0, "relevance_score": 0.85}, ...]
                reranked_docs = []
                for result in rerank_results:
                    index = result["index"]
                    relevance_score = result["relevance_score"]

                    # Get original document and add rerank score
                    if 0 <= index < len(retrieved_docs):
                        doc = retrieved_docs[index].copy()
                        doc["rerank_score"] = relevance_score
                        reranked_docs.append(doc)

                logger.info(
                    f"Successfully reranked: {len(reranked_docs)} chunks from {len(retrieved_docs)} original chunks"
                )
                return reranked_docs
            else:
                # Legacy format: assume it's already reranked documents
                logger.info(f"Using legacy rerank format: {len(rerank_results)} chunks")
                return rerank_results[:top_n] if top_n else rerank_results
        else:
            logger.warning("Rerank returned empty results, using original chunks")
            return retrieved_docs

    except Exception as e:
        logger.error(f"Error during reranking: {e}, using original chunks")
        return retrieved_docs


async def process_chunks_unified(
    query: str,
    unique_chunks: list[dict],
    query_param: "QueryParam",
    global_config: dict,
    source_type: str = "mixed",
    chunk_token_limit: int = None,  # Add parameter for dynamic token limit
) -> list[dict]:
    """
    Unified processing for text chunks: deduplication, chunk_top_k limiting, reranking, and token truncation.

    Args:
        query: Search query for reranking
        chunks: List of text chunks to process
        query_param: Query parameters containing configuration
        global_config: Global configuration dictionary
        source_type: Source type for logging ("vector", "entity", "relationship", "mixed")
        chunk_token_limit: Dynamic token limit for chunks (if None, uses default)

    Returns:
        Processed and filtered list of text chunks
    """
    if not unique_chunks:
        return []

    origin_count = len(unique_chunks)

    # 1. Apply reranking if enabled and query is provided
    if query_param.enable_rerank and query and unique_chunks:
        rerank_top_k = query_param.chunk_top_k or len(unique_chunks)
        unique_chunks = await apply_rerank_if_enabled(
            query=query,
            retrieved_docs=unique_chunks,
            global_config=global_config,
            enable_rerank=query_param.enable_rerank,
            top_n=rerank_top_k,
        )

    # 2. Filter by minimum rerank score if reranking is enabled
    if query_param.enable_rerank and unique_chunks:
        min_rerank_score = global_config.get("min_rerank_score", 0.5)
        if min_rerank_score > 0.0:
            original_count = len(unique_chunks)

            # Filter chunks with score below threshold
            filtered_chunks = []
            for chunk in unique_chunks:
                rerank_score = chunk.get(
                    "rerank_score", 1.0
                )  # Default to 1.0 if no score
                if rerank_score >= min_rerank_score:
                    filtered_chunks.append(chunk)

            unique_chunks = filtered_chunks
            filtered_count = original_count - len(unique_chunks)

            if filtered_count > 0:
                logger.info(
                    f"Rerank filtering: {len(unique_chunks)} chunks remained (min rerank score: {min_rerank_score})"
                )
            if not unique_chunks:
                return []

    # 3. Apply chunk_top_k limiting if specified
    if query_param.chunk_top_k is not None and query_param.chunk_top_k > 0:
        if len(unique_chunks) > query_param.chunk_top_k:
            unique_chunks = unique_chunks[: query_param.chunk_top_k]
        logger.debug(
            f"Kept chunk_top-k: {len(unique_chunks)} chunks (deduplicated original: {origin_count})"
        )

    # 4. Token-based final truncation
    tokenizer = global_config.get("tokenizer")
    if tokenizer and unique_chunks:
        # Set default chunk_token_limit if not provided
        if chunk_token_limit is None:
            # Get default from query_param or global_config
            chunk_token_limit = getattr(
                query_param,
                "max_total_tokens",
                global_config.get("MAX_TOTAL_TOKENS", DEFAULT_MAX_TOTAL_TOKENS),
            )

        original_count = len(unique_chunks)

        unique_chunks = truncate_list_by_token_size(
            unique_chunks,
            key=lambda x: "\n".join(
                json.dumps(item, ensure_ascii=False) for item in [x]
            ),
            max_token_size=chunk_token_limit,
            tokenizer=tokenizer,
        )

        logger.debug(
            f"Token truncation: {len(unique_chunks)} chunks from {original_count} "
            f"(chunk available tokens: {chunk_token_limit}, source: {source_type})"
        )

    # 5. add id field to each chunk
    final_chunks = []
    for i, chunk in enumerate(unique_chunks):
        chunk_with_id = chunk.copy()
        chunk_with_id["id"] = f"DC{i + 1}"
        final_chunks.append(chunk_with_id)

    return final_chunks


def normalize_source_ids_limit_method(method: str | None) -> str:
    """Normalize the source ID limiting strategy and fall back to default when invalid."""

    if not method:
        return DEFAULT_SOURCE_IDS_LIMIT_METHOD

    normalized = method.upper()
    if normalized not in VALID_SOURCE_IDS_LIMIT_METHODS:
        logger.warning(
            "Unknown SOURCE_IDS_LIMIT_METHOD '%s', falling back to %s",
            method,
            DEFAULT_SOURCE_IDS_LIMIT_METHOD,
        )
        return DEFAULT_SOURCE_IDS_LIMIT_METHOD

    return normalized


def merge_source_ids(
    existing_ids: Iterable[str] | None, new_ids: Iterable[str] | None
) -> list[str]:
    """Merge two iterables of source IDs while preserving order and removing duplicates."""

    merged: list[str] = []
    seen: set[str] = set()

    for sequence in (existing_ids, new_ids):
        if not sequence:
            continue
        for source_id in sequence:
            if not source_id:
                continue
            if source_id not in seen:
                seen.add(source_id)
                merged.append(source_id)

    return merged


def apply_source_ids_limit(
    source_ids: Sequence[str],
    limit: int,
    method: str,
    *,
    identifier: str | None = None,
) -> list[str]:
    """Apply a limit strategy to a sequence of source IDs."""

    if limit <= 0:
        return []

    source_ids_list = list(source_ids)
    if len(source_ids_list) <= limit:
        return source_ids_list

    normalized_method = normalize_source_ids_limit_method(method)

    if normalized_method == SOURCE_IDS_LIMIT_METHOD_FIFO:
        truncated = source_ids_list[-limit:]
    else:  # IGNORE_NEW
        truncated = source_ids_list[:limit]

    if identifier and len(truncated) < len(source_ids_list):
        logger.debug(
            "Source_id truncated: %s | %s keeping %s of %s entries",
            identifier,
            normalized_method,
            len(truncated),
            len(source_ids_list),
        )

    return truncated


def compute_incremental_chunk_ids(
    existing_full_chunk_ids: list[str],
    old_chunk_ids: list[str],
    new_chunk_ids: list[str],
) -> list[str]:
    """
    Compute incrementally updated chunk IDs based on changes.

    This function applies delta changes (additions and removals) to an existing
    list of chunk IDs while maintaining order and ensuring deduplication.
    Delta additions from new_chunk_ids are placed at the end.

    Args:
        existing_full_chunk_ids: Complete list of existing chunk IDs from storage
        old_chunk_ids: Previous chunk IDs from source_id (chunks being replaced)
        new_chunk_ids: New chunk IDs from updated source_id (chunks being added)

    Returns:
        Updated list of chunk IDs with deduplication

    Example:
        >>> existing = ['chunk-1', 'chunk-2', 'chunk-3']
        >>> old = ['chunk-1', 'chunk-2']
        >>> new = ['chunk-2', 'chunk-4']
        >>> compute_incremental_chunk_ids(existing, old, new)
        ['chunk-3', 'chunk-2', 'chunk-4']
    """
    # Calculate changes
    chunks_to_remove = set(old_chunk_ids) - set(new_chunk_ids)
    chunks_to_add = set(new_chunk_ids) - set(old_chunk_ids)

    # Apply changes to full chunk_ids
    # Step 1: Remove chunks that are no longer needed
    updated_chunk_ids = [
        cid for cid in existing_full_chunk_ids if cid not in chunks_to_remove
    ]

    # Step 2: Add new chunks (preserving order from new_chunk_ids)
    # Note: 'cid not in updated_chunk_ids' check ensures deduplication
    for cid in new_chunk_ids:
        if cid in chunks_to_add and cid not in updated_chunk_ids:
            updated_chunk_ids.append(cid)

    return updated_chunk_ids


def subtract_source_ids(
    source_ids: Iterable[str],
    ids_to_remove: Collection[str],
) -> list[str]:
    """Remove a collection of IDs from an ordered iterable while preserving order."""

    removal_set = set(ids_to_remove)
    if not removal_set:
        return [source_id for source_id in source_ids if source_id]

    return [
        source_id
        for source_id in source_ids
        if source_id and source_id not in removal_set
    ]


def make_relation_chunk_key(src: str, tgt: str) -> str:
    """Create a deterministic storage key for relation chunk tracking."""

    return GRAPH_FIELD_SEP.join(sorted((src, tgt)))


def parse_relation_chunk_key(key: str) -> tuple[str, str]:
    """Parse a relation chunk storage key back into its entity pair."""

    parts = key.split(GRAPH_FIELD_SEP)
    if len(parts) != 2:
        raise ValueError(f"Invalid relation chunk key: {key}")
    return parts[0], parts[1]


def generate_track_id(prefix: str = "upload") -> str:
    """Generate a unique tracking ID with timestamp and UUID

    Args:
        prefix: Prefix for the track ID (e.g., 'upload', 'insert')

    Returns:
        str: Unique tracking ID in format: {prefix}_{timestamp}_{uuid}
    """
    timestamp = datetime.now().strftime("%Y%m%d_%H%M%S")
    unique_id = str(uuid.uuid4())[:8]  # Use first 8 characters of UUID
    return f"{prefix}_{timestamp}_{unique_id}"


def get_pinyin_sort_key(text: str) -> str:
    """Generate sort key for Chinese pinyin sorting

    This function uses pypinyin for true Chinese pinyin sorting.
    If pypinyin is not available, it falls back to simple lowercase string sorting.

    Args:
        text: Text to generate sort key for

    Returns:
        str: Sort key that can be used for comparison and sorting
    """
    if not text:
        return ""

    if _PYPINYIN_AVAILABLE:
        try:
            # Convert Chinese characters to pinyin, keep non-Chinese as-is
            pinyin_list = pypinyin.lazy_pinyin(text, style=pypinyin.Style.NORMAL)
            return "".join(pinyin_list).lower()
        except Exception:
            # Silently fall back to simple string sorting on any error
            return text.lower()
    else:
        # pypinyin not available, use simple string sorting
        return text.lower()


def fix_tuple_delimiter_corruption(
    record: str, delimiter_core: str, tuple_delimiter: str
) -> str:
    """
    Fix various forms of tuple_delimiter corruption from LLM output.

    This function handles missing or replaced characters around the core delimiter.
    It fixes common corruption patterns where the LLM output doesn't match the expected
    tuple_delimiter format.

    Args:
        record: The text record to fix
        delimiter_core: The core delimiter (e.g., "S" from "<|#|>")
        tuple_delimiter: The complete tuple delimiter (e.g., "<|#|>")

    Returns:
        The corrected record with proper tuple_delimiter format
    """
    if not record or not delimiter_core or not tuple_delimiter:
        return record

    # Escape the delimiter core for regex use
    escaped_delimiter_core = re.escape(delimiter_core)

    # Fix: <|##|> -> <|#|>, <|#||#|> -> <|#|>, <|#|||#|> -> <|#|>
    record = re.sub(
        rf"<\|{escaped_delimiter_core}\|*?{escaped_delimiter_core}\|>",
        tuple_delimiter,
        record,
    )

    # Fix: <|\#|> -> <|#|>
    record = re.sub(
        rf"<\|\\{escaped_delimiter_core}\|>",
        tuple_delimiter,
        record,
    )

    # Fix: <|> -> <|#|>, <||> -> <|#|>
    record = re.sub(
        r"<\|+>",
        tuple_delimiter,
        record,
    )

    # Fix: <X|#|> -> <|#|>, <|#|Y> -> <|#|>, <X|#|Y> -> <|#|>, <||#||> -> <|#|> (one extra characters outside pipes)
    record = re.sub(
        rf"<.?\|{escaped_delimiter_core}\|.?>",
        tuple_delimiter,
        record,
    )

    # Fix: <#>, <#|>, <|#> -> <|#|> (missing one or both pipes)
    record = re.sub(
        rf"<\|?{escaped_delimiter_core}\|?>",
        tuple_delimiter,
        record,
    )

    # Fix: <X#|> -> <|#|>, <|#X> -> <|#|> (one pipe is replaced by other character)
    record = re.sub(
        rf"<[^|]{escaped_delimiter_core}\|>|<\|{escaped_delimiter_core}[^|]>",
        tuple_delimiter,
        record,
    )

    # Fix: <|#| -> <|#|>, <|#|| -> <|#|> (missing closing >)
    record = re.sub(
        rf"<\|{escaped_delimiter_core}\|+(?!>)",
        tuple_delimiter,
        record,
    )

    # Fix <|#: -> <|#|> (missing closing >)
    record = re.sub(
        rf"<\|{escaped_delimiter_core}:(?!>)",
        tuple_delimiter,
        record,
    )

    # Fix: <||#> -> <|#|> (double pipe at start, missing pipe at end)
    record = re.sub(
        rf"<\|+{escaped_delimiter_core}>",
        tuple_delimiter,
        record,
    )

    # Fix: <|| -> <|#|>
    record = re.sub(
        r"<\|\|(?!>)",
        tuple_delimiter,
        record,
    )

    # Fix: |#|> -> <|#|> (missing opening <)
    record = re.sub(
        rf"(?<!<)\|{escaped_delimiter_core}\|>",
        tuple_delimiter,
        record,
    )

    # Fix: <|#|>| -> <|#|>  ( this is a fix for: <|#|| -> <|#|> )
    record = re.sub(
        rf"<\|{escaped_delimiter_core}\|>\|",
        tuple_delimiter,
        record,
    )

    # Fix: ||#|| -> <|#|> (double pipes on both sides without angle brackets)
    record = re.sub(
        rf"\|\|{escaped_delimiter_core}\|\|",
        tuple_delimiter,
        record,
    )

    return record


def create_prefixed_exception(original_exception: Exception, prefix: str) -> Exception:
    """
    Safely create a prefixed exception that adapts to all error types.

    Args:
        original_exception: The original exception.
        prefix: The prefix to add.

    Returns:
        A new exception with the prefix, maintaining the original exception type if possible.
    """
    try:
        # Method 1: Try to reconstruct using original arguments.
        if hasattr(original_exception, "args") and original_exception.args:
            args = list(original_exception.args)
            # Find the first string argument and prefix it. This is safer for
            # exceptions like OSError where the first arg is an integer (errno).
            found_str = False
            for i, arg in enumerate(args):
                if isinstance(arg, str):
                    args[i] = f"{prefix}: {arg}"
                    found_str = True
                    break

            # If no string argument is found, prefix the first argument's string representation.
            if not found_str:
                args[0] = f"{prefix}: {args[0]}"

            return type(original_exception)(*args)
        else:
            # Method 2: If no args, try single parameter construction.
            return type(original_exception)(f"{prefix}: {str(original_exception)}")
    except (TypeError, ValueError, AttributeError) as construct_error:
        # Method 3: If reconstruction fails, wrap it in a RuntimeError.
        # This is the safest fallback, as attempting to create the same type
        # with a single string can fail if the constructor requires multiple arguments.
        return RuntimeError(
            f"{prefix}: {type(original_exception).__name__}: {str(original_exception)} "
            f"(Original exception could not be reconstructed: {construct_error})"
        )


def convert_to_user_format(
    entities_context: list[dict],
    relations_context: list[dict],
    chunks: list[dict],
    references: list[dict],
    query_mode: str,
    entity_id_to_original: dict = None,
    relation_id_to_original: dict = None,
) -> dict[str, Any]:
    """Convert internal data format to user-friendly format using original database data"""

    # Convert entities format using original data when available
    formatted_entities = []
    for entity in entities_context:
        entity_name = entity.get("entity", "")

        # Try to get original data first
        original_entity = None
        if entity_id_to_original and entity_name in entity_id_to_original:
            original_entity = entity_id_to_original[entity_name]

        if original_entity:
            # Use original database data
            formatted_entities.append(
                {
                    "entity_name": original_entity.get("entity_name", entity_name),
                    "entity_type": original_entity.get("entity_type", "UNKNOWN"),
                    "description": original_entity.get("description", ""),
                    "source_id": original_entity.get("source_id", ""),
                    "file_path": original_entity.get("file_path", "unknown_source"),
                    "created_at": original_entity.get("created_at", ""),
                }
            )
        else:
            # Fallback to LLM context data (for backward compatibility)
            formatted_entities.append(
                {
                    "entity_name": entity_name,
                    "entity_type": entity.get("type", "UNKNOWN"),
                    "description": entity.get("description", ""),
                    "source_id": entity.get("source_id", ""),
                    "file_path": entity.get("file_path", "unknown_source"),
                    "created_at": entity.get("created_at", ""),
                }
            )

    # Convert relationships format using original data when available
    formatted_relationships = []
    for relation in relations_context:
        entity1 = relation.get("entity1", "")
        entity2 = relation.get("entity2", "")
        relation_key = (entity1, entity2)

        # Try to get original data first
        original_relation = None
        if relation_id_to_original and relation_key in relation_id_to_original:
            original_relation = relation_id_to_original[relation_key]

        if original_relation:
            # Use original database data
            formatted_relationships.append(
                {
                    "src_id": original_relation.get("src_id", entity1),
                    "tgt_id": original_relation.get("tgt_id", entity2),
                    "description": original_relation.get("description", ""),
                    "keywords": original_relation.get("keywords", ""),
                    "weight": original_relation.get("weight", 1.0),
                    "source_id": original_relation.get("source_id", ""),
                    "file_path": original_relation.get("file_path", "unknown_source"),
                    "created_at": original_relation.get("created_at", ""),
                }
            )
        else:
            # Fallback to LLM context data (for backward compatibility)
            formatted_relationships.append(
                {
                    "src_id": entity1,
                    "tgt_id": entity2,
                    "description": relation.get("description", ""),
                    "keywords": relation.get("keywords", ""),
                    "weight": relation.get("weight", 1.0),
                    "source_id": relation.get("source_id", ""),
                    "file_path": relation.get("file_path", "unknown_source"),
                    "created_at": relation.get("created_at", ""),
                }
            )

    # Convert chunks format (chunks already contain complete data)
    formatted_chunks = []
    for i, chunk in enumerate(chunks):
        chunk_data = {
            "reference_id": chunk.get("reference_id", ""),
            "content": chunk.get("content", ""),
            "file_path": chunk.get("file_path", "unknown_source"),
            "chunk_id": chunk.get("chunk_id", ""),
        }
        formatted_chunks.append(chunk_data)

    logger.debug(
        f"[convert_to_user_format] Formatted {len(formatted_chunks)}/{len(chunks)} chunks"
    )

    # Build basic metadata (metadata details will be added by calling functions)
    metadata = {
        "query_mode": query_mode,
        "keywords": {
            "high_level": [],
            "low_level": [],
        },  # Placeholder, will be set by calling functions
    }

    return {
        "status": "success",
        "message": "Query processed successfully",
        "data": {
            "entities": formatted_entities,
            "relationships": formatted_relationships,
            "chunks": formatted_chunks,
            "references": references,
        },
        "metadata": metadata,
    }


def generate_reference_list_from_chunks(
    chunks: list[dict],
) -> tuple[list[dict], list[dict]]:
    """
    Generate reference list from chunks, prioritizing by occurrence frequency.

    This function extracts file_paths from chunks, counts their occurrences,
    sorts by frequency and first appearance order, creates reference_id mappings,
    and builds a reference_list structure.

    Args:
        chunks: List of chunk dictionaries with file_path information

    Returns:
        tuple: (reference_list, updated_chunks_with_reference_ids)
            - reference_list: List of dicts with reference_id and file_path
            - updated_chunks_with_reference_ids: Original chunks with reference_id field added
    """
    if not chunks:
        return [], []

    # 1. Extract all valid file_paths and count their occurrences
    file_path_counts = {}
    for chunk in chunks:
        file_path = chunk.get("file_path", "")
        if file_path and file_path != "unknown_source":
            file_path_counts[file_path] = file_path_counts.get(file_path, 0) + 1

    # 2. Sort file paths by frequency (descending), then by first appearance order
    # Create a list of (file_path, count, first_index) tuples
    file_path_with_indices = []
    seen_paths = set()
    for i, chunk in enumerate(chunks):
        file_path = chunk.get("file_path", "")
        if file_path and file_path != "unknown_source" and file_path not in seen_paths:
            file_path_with_indices.append((file_path, file_path_counts[file_path], i))
            seen_paths.add(file_path)

    # Sort by count (descending), then by first appearance index (ascending)
    sorted_file_paths = sorted(file_path_with_indices, key=lambda x: (-x[1], x[2]))
    unique_file_paths = [item[0] for item in sorted_file_paths]

    # 3. Create mapping from file_path to reference_id (prioritized by frequency)
    file_path_to_ref_id = {}
    for i, file_path in enumerate(unique_file_paths):
        file_path_to_ref_id[file_path] = str(i + 1)

    # 4. Add reference_id field to each chunk
    updated_chunks = []
    for chunk in chunks:
        chunk_copy = chunk.copy()
        file_path = chunk_copy.get("file_path", "")
        if file_path and file_path != "unknown_source":
            chunk_copy["reference_id"] = file_path_to_ref_id[file_path]
        else:
            chunk_copy["reference_id"] = ""
        updated_chunks.append(chunk_copy)

    # 5. Build reference_list
    reference_list = []
    for i, file_path in enumerate(unique_file_paths):
        reference_list.append({"reference_id": str(i + 1), "file_path": file_path})

    return reference_list, updated_chunks